RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 DSELQ8IZU8 1212 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 CENPLQ8N0S6 344 aaPredicted RBP11.85□□□□□ -0.51
LINC01001-201ENST00000526704 LSMEM2Q8N112 164 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 PQLC1Q8N2U9 271 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 ARHGAP18Q8N392 663 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 CPSF7Q8N684 471 aaKnown RBP11.85□□□□□ -0.51
LINC01001-201ENST00000526704 ZMIZ2Q8NF64 920 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 GTF3C2Q8WUA4 911 aaPredicted RBP11.85□□□□□ -0.51
LINC01001-201ENST00000526704 KCTD4Q8WVF5 259 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 NCSTNQ92542 709 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 PGAP3Q96FM1 320 aaPredicted RBP11.85□□□□□ -0.51
LINC01001-201ENST00000526704 MAML3Q96JK9 1138 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 TEKT5Q96M29 485 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 BTBD9Q96Q07 612 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 TSPAN18Q96SJ8 248 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 NUF2Q9BZD4 464 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 RHOJQ9H4E5 214 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 DDIT4Q9NX09 232 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 ZDHHC2Q9UIJ5 367 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 G3BP2Q9UN86 482 aaKnown RBP11.85□□□□□ -0.51
LINC01001-201ENST00000526704 PSMD13Q9UNM6 376 aa11.85□□□□□ -0.51
LINC01001-201ENST00000526704 RGSL1A5PLK6 1076 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 TARM1B6A8C7 271 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 F2P00734 622 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 USP17L7P0C7H9 530 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 NCAM1P13591 858 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 SAT1P21673 171 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 GABRB3P28472 473 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 LRPAP1P30533 357 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 PPARGP37231 505 aaPredicted RBP11.84□□□□□ -0.51
LINC01001-201ENST00000526704 AVPR1AP37288 418 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 HADHAP40939 763 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 ALDH1A3P47895 512 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 CDH17Q12864 832 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 PDK3Q15120 406 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 PDCD2Q16342 344 aaPredicted RBP11.84□□□□□ -0.51
LINC01001-201ENST00000526704 PIGGQ5H8A4 983 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 BHLHA9Q7RTU4 235 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 SDCCAG8Q86SQ7 713 aaPredicted RBP11.84□□□□□ -0.51
LINC01001-201ENST00000526704 FAM35AQ86V20 835 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 KYQ8NBH2 561 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 STYXQ8WUJ0 223 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 RCN3Q96D15 328 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 APBA2Q99767 749 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 KIFC1Q9BW19 673 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 DTNAQ9Y4J8 743 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 CAPN8A6NHC0 703 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 SLC22A2O15244 555 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 CABYRO75952 493 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 JCHAINP01591 159 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 XRCC1P18887 633 aaPredicted RBP11.84□□□□□ -0.51
LINC01001-201ENST00000526704 HK2P52789 917 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 FOLH1Q04609 750 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 PRKAA1Q13131 559 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 ZNF423Q2M1K9 1284 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 RAB41Q5JT25 222 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 MAP3K21Q5TCX8 1036 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 TMEM198Q66K66 360 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 BNC2Q6ZN30 1099 aaPredicted RBP11.84□□□□□ -0.51
LINC01001-201ENST00000526704 OTOP3Q7RTS5 596 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 TMC7Q7Z402 723 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 SLC41A1Q8IVJ1 513 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 KLHDC8BQ8IXV7 354 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 ICA1LQ8NDH6 482 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 RP9Q8TA86 221 aaKnown RBP11.84□□□□□ -0.51
LINC01001-201ENST00000526704 STON2Q8WXE9 905 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 ITFG2Q969R8 447 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 DCUN1D1Q96GG9 259 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 CELF6Q96J87 481 aaKnown RBP11.84□□□□□ -0.51
LINC01001-201ENST00000526704 ZFP42Q96MM3 310 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 CATSPER2Q96P56 530 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 PPP1R10Q96QC0 940 aaKnown RBP11.84□□□□□ -0.51
LINC01001-201ENST00000526704 VAT1Q99536 393 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 COLEC11Q9BWP8 271 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 CNGB3Q9NQW8 809 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 NSMCE4AQ9NXX6 385 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 C6orf203Q9P0P8 240 aaPredicted RBP11.84□□□□□ -0.51
LINC01001-201ENST00000526704 TLK1Q9UKI8 766 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 TRPM7Q96QT4 1865 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 MYO16Q9Y6X6 1858 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 NLRC5Q86WI3 1866 aa11.84□□□□□ -0.51
LINC01001-201ENST00000526704 C15orf38-AP3S2A0A0A6YYH1 394 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 TXNDC9O14530 226 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 LRIG2O94898 1065 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 PGK1P00558 417 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 YBX3P16989 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
LINC01001-201ENST00000526704 TFEBP19484 476 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 DPP6P42658 865 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 NAGLUP54802 743 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 ZNF460Q14592 562 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 USP10Q14694 798 aaKnown RBP11.83□□□□□ -0.52
LINC01001-201ENST00000526704 PPP2R5DQ14738 602 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 SLC5A9Q2M3M2 681 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 ARL13BQ3SXY8 428 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 NAPEPLDQ6IQ20 393 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 LRRC8EQ6NSJ5 796 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 ARPINQ7Z6K5 226 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 MFSD6LQ8IWD5 586 aa11.83□□□□□ -0.52
LINC01001-201ENST00000526704 FSTL5Q8N475 847 aaPredicted RBP11.83□□□□□ -0.52
LINC01001-201ENST00000526704 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms