RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 MZF1P28698 734 aaPredicted RBP7□□□□□ -1.29
CTNNA1-216ENST00000519489 SSTR2P30874 369 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 KIR3DL1P43629 444 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 RCAN1P53805 252 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 ITGA1P56199 1179 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 CNTN1Q12860 1018 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 CHAF1BQ13112 559 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 ERV3-1Q14264 604 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 NECTIN1Q15223 517 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 TLR1Q15399 786 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 CDSNQ15517 529 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 PLEKHN1Q494U1 663 aaPredicted RBP7□□□□□ -1.29
CTNNA1-216ENST00000519489 SETMARQ53H47 684 aaPredicted RBP7□□□□□ -1.29
CTNNA1-216ENST00000519489 OXLD1Q5BKU9 147 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 PHF19Q5T6S3 580 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 DUS1LQ6P1R4 473 aaKnown RBP7□□□□□ -1.29
CTNNA1-216ENST00000519489 GPRIN1Q7Z2K8 1008 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 CD302Q8IX05 232 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 FAM217AQ8IXS0 508 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 TOP6BLQ8N6T0 577 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 TMEM159Q96B96 161 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 IL12RB2Q99665 862 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 MRPL45Q9BRJ2 306 aaKnown RBP7□□□□□ -1.29
CTNNA1-216ENST00000519489 KRTAP17-1Q9BYP8 105 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 NACA2Q9H009 215 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 RDH14Q9HBH5 336 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 ANO2Q9NQ90 1003 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 OCIAD1Q9NX40 245 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 SIRPGQ9P1W8 387 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 SLCO3A1Q9UIG8 710 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 GGA2Q9UJY4 613 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 TPX2Q9ULW0 747 aaKnown RBP7□□□□□ -1.29
CTNNA1-216ENST00000519489 OSGIN2Q9Y236 505 aa7□□□□□ -1.29
CTNNA1-216ENST00000519489 MYH10P35580 1976 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 A0A1W2PQU0 124 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 LMO7DNF2Z398 122 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 E2F3O00716 465 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 RTN3O95197 1032 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 BAG4O95429 457 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 HMBSP08397 361 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 TSHRP16473 764 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 RPA1P27694 616 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 CORO1AP31146 461 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 ATP5C1P36542 298 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 PGDP52209 483 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 IST1P53990 364 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 TLE4Q04727 773 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 CDK18Q07002 472 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 PDE4CQ08493 712 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 TCEA2Q15560 299 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 CALCRLQ16602 461 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 TMEM164Q5U3C3 297 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 SEL1L3Q68CR1 1132 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 ANKS6Q68DC2 871 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 C1orf186Q6ZWK4 172 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 HS2ST1Q7LGA3 356 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 PTAR1Q7Z6K3 402 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 SCD5Q86SK9 330 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 CCNJLQ8IV13 435 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 DENND1CQ8IV53 801 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 APLFQ8IW19 511 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 CCDC83Q8IWF9 413 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 WFIKKN2Q8TEU8 576 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 DDI1Q8WTU0 396 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 INPP5DQ92835 1189 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 MSTO1Q9BUK6 570 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 ASB7Q9H672 318 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 GDPD2Q9HCC8 539 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 SLAMF7Q9NQ25 335 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 MRPL40Q9NQ50 206 aaKnown RBP6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 NDFIP2Q9NV92 336 aa6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.99□□□□□ -1.29
CTNNA1-216ENST00000519489 A0A1W2PQH9 124 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 E9PMD0 336 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 KCNN4O15554 427 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 B4GAT1O43505 415 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 RNASEH1O60930 286 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 IL1BP01584 269 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 PIGRP01833 764 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 FOSL1P15407 271 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 WARSP23381 471 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 NUDT1P36639 197 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 RECQLP46063 649 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 PLA2G4AP47712 749 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 GDF10P55107 478 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 STRN3Q13033 797 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 SEMA5AQ13591 1074 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 PRRT3Q5FWE3 981 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 KCNK18Q7Z418 384 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 SPRED1Q7Z699 444 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 FJX1Q86VR8 437 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 PARGQ86W56 976 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 SFR1Q86XK3 245 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 NLGN4XQ8N0W4 816 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 CPXM2Q8N436 756 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 ARL10Q8N8L6 244 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 PLPP7Q8NBV4 271 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 NLGN4YQ8NFZ3 816 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 TNFRSF25Q93038 417 aa6.98□□□□□ -1.29
CTNNA1-216ENST00000519489 TTC17Q96AE7 1141 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms