RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 HLA-DRAP01903 254 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 C4BPAP04003 597 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 KRT1P04264 644 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CD3EP07766 207 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 WEE2P0C1S8 567 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 OR4Q2P0C623 313 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 P4HA1P13674 534 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 VAV1P15498 845 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 TSHRP16473 764 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 TYMPP19971 482 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 GTF2H1P32780 548 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 GNL1P36915 607 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 KIR3DL1P43629 444 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 NOP2P46087 812 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 HSPA7P48741 367 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 MXI1P50539 228 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CLCN4P51793 760 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SLC12A2P55011 1212 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 GPR85P60893 370 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 MRPS5P82675 430 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 SRSF2Q01130 221 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 POU4F1Q01851 419 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PPP3CAQ08209 521 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 AP1B1Q10567 949 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CETN1Q12798 172 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 LRMPQ12912 555 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SCARB2Q14108 478 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PLCL1Q15111 1095 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 AAK1Q2M2I8 961 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 MPEG1Q2M385 716 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SGSM1Q2NKQ1 1148 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 KLHL40Q2TBA0 621 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 UAP1L1Q3KQV9 507 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 MMEL1Q495T6 779 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SLC39A12Q504Y0 691 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ZNF667Q5HYK9 610 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 RARS2Q5T160 578 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 LIN9Q5TKA1 542 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 KRT39Q6A163 491 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 TRIM68Q6AZZ1 485 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CES5AQ6NT32 575 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SLC30A6Q6NXT4 461 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SHQ1Q6PI26 577 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 OGFOD3Q6PK18 319 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PAOXQ6QHF9 649 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 RSPO2Q6UXX9 243 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 TMC5Q6UXY8 1006 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SCARA5Q6ZMJ2 495 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 USP45Q70EL2 814 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 FRMD5Q7Z6J6 570 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 EPHX4Q8IUS5 362 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 FAM114A1Q8IWE2 563 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PPIL6Q8IXY8 311 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 RNF168Q8IYW5 571 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 ADGRF2Q8IZF7 708 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PRR18Q8N4B5 295 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PDCL2Q8N4E4 241 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 C12orf76Q8N812 135 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 OR6B3Q8NGW1 331 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PCDH19Q8TAB3 1148 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 TMEM174Q8WUU8 243 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CASP10Q92851 521 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PABPC5Q96DU9 382 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 TCTN2Q96GX1 697 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PGLYRP2Q96PD5 576 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PI4K2AQ9BTU6 479 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CNPPD1Q9BV87 410 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 IMPG2Q9BZV3 1241 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 NAT10Q9H0A0 1025 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 CCDC68Q9H2F9 335 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 UBE2ZQ9H832 354 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 CYP4F11Q9HBI6 524 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 RXFP1Q9HBX9 757 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 TMEM8AQ9HCN3 771 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 OBP2BQ9NPH6 170 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 GPR27Q9NS67 375 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 ARGLU1Q9NWB6 273 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 PIH1D1Q9NWS0 290 aaKnown RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 KIF17Q9P2E2 1029 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 THEGQ9P2T0 379 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 MTRRQ9UBK8 725 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 DPP7Q9UHL4 492 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 SIX4Q9UIU6 781 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CD207Q9UJ71 328 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 FBXL5Q9UKA1 691 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.88□□□□□ -1.95
SKP1-204ENST00000517691 BACE2Q9Y5Z0 518 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 HCFC2Q9Y5Z7 792 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 IRAK3Q9Y616 596 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 MICAL3Q7RTP6 2002 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 MYH15Q9Y2K3 1946 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 COL4A6Q14031 1691 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 WDR81Q562E7 1941 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.88□□□□□ -1.95
SKP1-204ENST00000517691 CCDC195A0A1B0GUA6 201 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 CAPN8A6NHC0 703 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 OR6C75A6NL08 312 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 LGALS16A8MUM7 142 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 BECN2A8MW95 431 aa2.88□□□□□ -1.95
SKP1-204ENST00000517691 A8MXQ7 604 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms