RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 FCGR2AP12318 317 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 PBX3P40426 434 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 PTPN9P43378 593 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 CPA2P48052 419 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 EFNA5P52803 228 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 PRAMEP78395 509 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 STK4Q13043 487 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 C5orf22Q49AR2 442 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 FBXO43Q4G163 708 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 TTI2Q6NXR4 508 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 SLC30A6Q6NXT4 461 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 TMEM154Q6P9G4 183 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 TFAP2DQ7Z6R9 452 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 AMER2Q8N7J2 671 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 FRMD1Q8N878 549 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 FAM47BQ8NA70 645 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 ZNF398Q8TD17 642 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 POMGNT1Q8WZA1 660 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 CALML4Q96GE6 196 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 CCDC34Q96HJ3 373 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 GLIS2Q9BZE0 524 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 SPATS2LQ9NUQ6 558 aaKnown RBP5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 MORF4L1Q9UBU8 362 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 INTS6Q9UL03 887 aaKnown RBP5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 ICKQ9UPZ9 632 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 REXO2Q9Y3B8 237 aaKnown RBP5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 CAPN7Q9Y6W3 813 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 FNDC1Q4ZHG4 1894 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 ARHGAP10A1A4S6 786 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 CBY3A6NI87 242 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 TTC36A6NLP5 189 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 CDRT15L2A8MXV6 281 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 RRHO14718 337 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 ERAL1O75616 437 aaKnown RBP5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 RARRES1P49788 294 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 NIPAL4Q0D2K0 466 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 CSTF3Q12996 717 aaKnown RBP5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 MED22Q15528 200 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 PFKFB3Q16875 520 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 DPCR1Q3MIW9 517 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 C10orf76Q5T2E6 689 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 SERTAD4-AS1Q5TG53 156 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 TBC1D9BQ66K14 1250 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 KLHL35Q6PF15 583 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 IL20RBQ6UXL0 311 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 RBM44Q6ZP01 1051 aaKnown RBP5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 FAM160B2Q86V87 743 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 UEVLDQ8IX04 471 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 GHDCQ8N2G8 530 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 WIPF2Q8TF74 440 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 PGAM5Q96HS1 289 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 SLC32A1Q9H598 525 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 CYP4F11Q9HBI6 524 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 SNTG1Q9NSN8 517 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 RPS6KA6Q9UK32 745 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 PCDHGB4Q9UN71 923 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 A4GNTQ9UNA3 340 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 DHDHQ9UQ10 334 aa5.78□□□□□ -1.48
HMGB1P47-201ENST00000511281 MST1RQ04912 1400 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 FAM237BA0A1B0GVD1 139 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 POC1B-GALNT4F8VUJ3 575 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 CCER2I3L3R5 266 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 GCATO75600 419 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 MAKP20794 623 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 TTKP33981 857 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 NNMTP40261 264 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 SKIV2L2P42285 1042 aaKnown RBP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 YWHAZP63104 245 aaKnown RBP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 SIM1P81133 766 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 CALD1Q05682 793 aaKnown RBP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 IRF3Q14653 427 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 KPNB1Q14974 876 aaKnown RBP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 FAM153CQ494X1 144 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 RAB41Q5JT25 222 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 FAM171A1Q5VUB5 890 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 RPUSD3Q6P087 351 aaKnown RBP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 DHRS13Q6UX07 377 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 NEU4Q8WWR8 484 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 SMARCE1Q969G3 411 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 CAVIN3Q969G5 261 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 ZNF764Q96H86 408 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 BAG1Q99933 345 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 H2AFJQ9BTM1 129 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 MXD3Q9BW11 206 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 AP1M1Q9BXS5 423 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 KAT14Q9H8E8 782 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 FBRSL1Q9HCM7 1045 aaKnown RBP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 ABI3Q9P2A4 366 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 SUCLA2Q9P2R7 463 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 NLKQ9UBE8 527 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 GIMAP2Q9UG22 337 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 TNFSF13BQ9Y275 285 aa5.77□□□□□ -1.49
HMGB1P47-201ENST00000511281 AOX1Q06278 1338 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 TCRBV7S3A2A0A539 114 aa5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P47-201ENST00000511281 UBE2Q2LH0YL09 131 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms