RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 H2AFB1P0C5Y9 115 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 H2AFB2P0C5Z0 115 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 ARP10275 920 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 HGFP14210 728 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 DPP6P42658 865 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 CDR1P51861 262 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 SESN2P58004 480 aaPredicted RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 ZXDAP98168 799 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 TFDP1Q14186 410 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 EIF4HQ15056 248 aaKnown RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 NONOQ15233 471 aaKnown RBP eCLIP5.28□□□□□ -1.56
NEK1-204ENST00000509912 HSDL1Q3SXM5 330 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 CWC27Q6UX04 472 aaKnown RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 ZNF572Q7Z3I7 529 aaPredicted RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 ECHDC2Q86YB7 292 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 IGDCC3Q8IVU1 814 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 UNC5BQ8IZJ1 945 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 ZNF276Q8N554 614 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 TBC1D15Q8TC07 691 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 TMEM176AQ96HP8 235 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 GPHA2Q96T91 129 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 RTP3Q9BQQ7 232 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 IFIH1Q9BYX4 1025 aaKnown RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 GCOM2Q9BZD3 368 aaPredicted RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 BRD8Q9H0E9 1235 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 DNAH12Q6ZR08 3092 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 NCAM1P13591 858 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 CPA1P15085 419 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 SFPQP23246 707 aaKnown RBP eCLIP5.28□□□□□ -1.56
NEK1-204ENST00000509912 CDC25AP30304 524 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 GPC3P51654 580 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 EFNA5P52803 228 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 HMGN5P82970 282 aaKnown RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 TBX2Q13207 712 aaPredicted RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 DCAF4L1Q3SXM0 396 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 ARL6IP4Q66PJ3 421 aaKnown RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 ATL3Q6DD88 541 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 CCDC117Q8IWD4 279 aaPredicted RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 ABI1Q8IZP0 508 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 DNASE1L2Q92874 299 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 HSD17B14Q9BPX1 270 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 NDC1Q9BTX1 674 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 PACSIN1Q9BY11 444 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 ZNF518BQ9C0D4 1074 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 GPR88Q9GZN0 384 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 XPR1Q9UBH6 696 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 WNT16Q9UBV4 365 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 FBXO4Q9UKT5 387 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 SNX14Q9Y5W7 946 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 PLXNA3P51805 1871 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 A0A087WWL8 130 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 SMCO2A6NFE2 343 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 PCDH17O14917 1159 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 SPTLC2O15270 562 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 ZSCAN22P10073 491 aaPredicted RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 PIM1P11309 404 aaPredicted RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 RPL9P32969 192 aaKnown RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 RPS9P46781 194 aaKnown RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 CD97P48960 835 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 ZNF134P52741 427 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 LILRA4P59901 499 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 NHLH1Q02575 133 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 ITGB3BPQ13352 177 aaPredicted RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 E2F5Q15329 346 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 KIAA0408Q6ZU52 694 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 TAS1R1Q7RTX1 841 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 OTUD6BQ8N6M0 293 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 CCDC150Q8NCX0 1101 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 MCPH1Q8NEM0 835 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 BEST2Q8NFU1 509 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 KBTBD7Q8WVZ9 684 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 TRIM44Q96DX7 344 aaPredicted RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 LRIG1Q96JA1 1093 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 AK8Q96MA6 479 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 TMEM209Q96SK2 561 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 FZD8Q9H461 694 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 TLR8Q9NR97 1041 aaKnown RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 AGPAT5Q9NUQ2 364 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 SIRT5Q9NXA8 310 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 SPG21Q9NZD8 308 aa5.28□□□□□ -1.56
NEK1-204ENST00000509912 CGNQ9P2M7 1197 aaKnown RBP5.28□□□□□ -1.56
NEK1-204ENST00000509912 UNC80Q8N2C7 3258 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 GJB3O75712 270 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 BAG4O95429 457 aaKnown RBP5.27□□□□□ -1.57
NEK1-204ENST00000509912 ITGA2BP08514 1039 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 BTF3P20290 206 aaKnown RBP5.27□□□□□ -1.57
NEK1-204ENST00000509912 CASP2P42575 452 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 MEOX1P50221 254 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 HYAL1Q12794 435 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 ALCAMQ13740 583 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 HABP2Q14520 560 aaPredicted RBP5.27□□□□□ -1.57
NEK1-204ENST00000509912 VMACQ2NL98 169 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 FAM47EQ6ZV65 393 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 SLC30A5Q8TAD4 765 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 GLG1Q92896 1179 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 C3orf49Q96BT1 292 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 GRAMD1AQ96CP6 724 aa5.27□□□□□ -1.57
NEK1-204ENST00000509912 PWWP2AQ96N64 755 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms