RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	HMGB2	P26583	209 aa	Known RBP	4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	PPP2R1A	P30153	589 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	CCT4	P50991	539 aa	Known RBP	4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	FAM3B	P58499	235 aa	Predicted RBP	4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	RPL15	P61313	204 aa	Known RBP	4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	TLE3	Q04726	772 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	PTK2B	Q14289	1009 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	SPARCL1	Q14515	664 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	STARD3	Q14849	445 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	PGM5	Q15124	567 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	MIDN	Q504T8	468 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	RINT1	Q6NUQ1	792 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	WDR93	Q6P2C0	686 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	OLFM4	Q6UX06	510 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	DHRS13	Q6UX07	377 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	SLC39A5	Q6ZMH5	540 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	ZNF793	Q6ZN11	406 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165		Q7L0L9	218 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	ADGRF3	Q8IZF5	1079 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	MPLKIP	Q8TAP9	179 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	EID2B	Q96D98	161 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	ZNF347	Q96SE7	839 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	FOXP1	Q9H334	677 aa	Predicted RBP	4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	HS3ST3B1	Q9Y662	390 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	MUC6	Q6W4X9	2439 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	BCOR	Q6W2J9	1755 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	KDM3B	Q7LBC6	1761 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	TJP1	Q07157	1748 aa		4.58	□□□□□ -1.68
NFKB1-208	ENST00000509165	ABHD14A-ACY1	A0A1B0GW23	586 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	KIF28P	B7ZC32	967 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	KCNAB3	O43448	404 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	TNFRSF6B	O95407	300 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	NTN1	O95631	604 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	PEPD	P12955	493 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	AKR1A1	P14550	325 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	AMPH	P49418	695 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	LINC00205	P59089	165 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	GALNT1	Q10472	559 aa	Predicted RBP	4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	UBE4A	Q14139	1066 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	RALBP1	Q15311	655 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	PKN2	Q16513	984 aa	Known RBP	4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	ANXA2R	Q3ZCQ2	193 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	TTLL5	Q6EMB2	1281 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	NRSN1	Q8IZ57	195 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	ACRBP	Q8NEB7	543 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	SRFBP1	Q8NEF9	429 aa	Known RBP	4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	OR52N4	Q8NGI2	321 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	WDR60	Q8WVS4	1066 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	RSC1A1	Q92681	617 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	MECR	Q9BV79	373 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	TRIM2	Q9C040	744 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	PRDM16	Q9HAZ2	1276 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	OBP2B	Q9NPH6	170 aa		4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	AGO2	Q9UKV8	859 aa	Known RBP	4.57	□□□□□ -1.68
NFKB1-208	ENST00000509165	PCDH11X	Q9BZA7	1347 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	PCDH11Y	Q9BZA8	1340 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	LGALS16	A8MUM7	142 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165		F8W810	466 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165		H0YIN7	160 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	ATG13	O75143	517 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	TOMM40	O96008	361 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	SETSIP	P0DME0	302 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	CYP3A7	P24462	503 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	PDIA3	P30101	505 aa	Known RBP	4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	ME1	P48163	572 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	HUNK	P57058	714 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	TAS2R50	P59544	299 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	DDX10	Q13206	875 aa	Known RBP	4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	ZNF260	Q3ZCT1	412 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	KIAA1755	Q5JYT7	1200 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	ASPHD1	Q5U4P2	390 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	ANKRD40	Q6AI12	368 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	GATAD2A	Q86YP4	633 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	MMP21	Q8N119	569 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	ZNF527	Q8NB42	609 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	KAT2B	Q92831	832 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	FAM122A	Q96E09	287 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	TUBB6	Q9BUF5	446 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	IL21R	Q9HBE5	538 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	MSRB1	Q9NZV6	116 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	NFU1	Q9UMS0	254 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	PCDHA12	Q9UN75	941 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	CNTN6	Q9UQ52	1028 aa		4.56	□□□□□ -1.68
NFKB1-208	ENST00000509165	CEMIP	Q8WUJ3	1361 aa		4.55	□□□□□ -1.68
NFKB1-208	ENST00000509165	TTC3	P53804	2025 aa		4.55	□□□□□ -1.68
NFKB1-208	ENST00000509165	KIR2DS5	A0A0G2JLQ3	304 aa		4.55	□□□□□ -1.68
NFKB1-208	ENST00000509165	CCDC194	A0A1B0GVG4	234 aa		4.55	□□□□□ -1.68
NFKB1-208	ENST00000509165		A0A1W2PPC1	479 aa		4.55	□□□□□ -1.68
NFKB1-208	ENST00000509165	C3orf70	A6NLC5	250 aa	Predicted RBP	4.55	□□□□□ -1.68
NFKB1-208	ENST00000509165	SLC38A8	A6NNN8	435 aa		4.55	□□□□□ -1.68
NFKB1-208	ENST00000509165	KIR2DS3	K7RE56	304 aa		4.55	□□□□□ -1.68
NFKB1-208	ENST00000509165	UGDH	O60701	494 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms