RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 RCCD1A6NED2 376 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 PROB1E7EW31 1015 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 APOL1O14791 398 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 PPP1R12AO14974 1030 aaPredicted RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 MAP3K13O43283 966 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 PRAMEF11O60813 436 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 SIN3BO75182 1162 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 NDUFS2O75306 463 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 PALMO75781 387 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 ZMPSTE24O75844 475 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 NEBLO76041 1014 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 IGSF6O95976 241 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 IL1BP01584 269 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 AMPD1P23109 780 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 CTNNA2P26232 953 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 ACVRL1P37023 503 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 PXNP49023 591 aaPredicted RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 NR2C2P49116 596 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 PAPOLAP51003 745 aaKnown RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 DNA2P51530 1060 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 COPAP53621 1224 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 RWDD2BP57060 319 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 ARF5P84085 180 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 CCZ1BP86790 482 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 CCZ1P86791 482 aaPredicted RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 ZNF33AQ06730 810 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 IL10RBQ08334 325 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 SIM2Q14190 667 aaPredicted RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 PAFAH1B3Q15102 231 aaKnown RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 PPP2R5EQ16537 467 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 LINGO4Q6UY18 593 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 Q6ZVU0 165 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 USP30Q70CQ3 517 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 ZNF366Q8N895 744 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 TMIEQ8NEW7 156 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 TRIM58Q8NG06 486 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 PTPRN2Q92932 1015 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 NKD2Q969F2 451 aaPredicted RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 MS4A3Q96HJ5 214 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 CELF6Q96J87 481 aaKnown RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 LOXL4Q96JB6 756 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 GDAP1L1Q96MZ0 367 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 RNF157Q96PX1 679 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 CINPQ9BW66 212 aaPredicted RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 OSBPL1AQ9BXW6 950 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 TPSD1Q9BZJ3 242 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 SLC39A8Q9C0K1 460 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 MKRN2Q9H000 416 aaKnown RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 BRD8Q9H0E9 1235 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 PCED1AQ9H1Q7 454 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 NOL6Q9H6R4 1146 aaKnown RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 CD248Q9HCU0 757 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 KLHL11Q9NVR0 708 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 USP36Q9P275 1121 aaKnown RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 SEPT3Q9UH03 358 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 IL36AQ9UHA7 158 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 IPO11Q9UI26 975 aaKnown RBP9.31□□□□□ -0.92
NUP54-207ENST00000508583 GMEB2Q9UKD1 530 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 FZD4Q9ULV1 537 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 GUCA1BQ9UMX6 200 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 EFR3BQ9Y2G0 817 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 PCDHA3Q9Y5H8 950 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 DUSP10Q9Y6W6 482 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 PLXND1Q9Y4D7 1925 aa9.31□□□□□ -0.92
NUP54-207ENST00000508583 SPAG17Q6Q759 2223 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 GOLGA6L9A6NEM1 432 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 SLC7A4O43246 635 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 TMCC1O94876 653 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 POP4O95707 220 aaKnown RBP9.3□□□□□ -0.92
NUP54-207ENST00000508583 MT-CO1P00395 513 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 IGLV3-19P01714 112 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 LMNAP02545 664 aaKnown RBP9.3□□□□□ -0.92
NUP54-207ENST00000508583 CD48P09326 243 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 TGM2P21980 687 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 GLDCP23378 1020 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 IL4RP24394 825 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 CD6P30203 668 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 CHRNA3P32297 505 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 P2RY2P41231 377 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 GARSP41250 739 aaKnown RBP9.3□□□□□ -0.92
NUP54-207ENST00000508583 TPMTP51580 245 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 RHOAP61586 193 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 RPS14P62263 151 aaKnown RBP9.3□□□□□ -0.92
NUP54-207ENST00000508583 NHLH1Q02575 133 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 DMWDQ09019 674 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 ZNF235Q14590 738 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 PDK1Q15118 436 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 CST6Q15828 149 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 ATP13A4Q4VNC1 1196 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 CARD16Q5EG05 197 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 RALGPS1Q5JS13 557 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 CCDC181Q5TID7 509 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 NCBP2-AS2Q69YL0 99 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 SLC9A4Q6AI14 798 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 LAIR1Q6GTX8 287 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 PRR23BQ6ZRT6 265 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 LPCAT2Q7L5N7 544 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 RABEPKQ7Z6M1 372 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 RFX6Q8HWS3 928 aa9.3□□□□□ -0.92
NUP54-207ENST00000508583 MMAAQ8IVH4 418 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms