RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 CBX4O00257 560 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 PLK4O00444 970 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 WNT9AO14904 365 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 PCDHGA12O60330 932 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 RTN2O75298 545 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 TRIM16O95361 564 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 WNT1P04628 370 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 TBC1D3HP0C7X1 549 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 KCNA4P22459 653 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 CD38P28907 300 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 ACVRL1P37023 503 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 SERPINH1P50454 418 aaKnown RBP12.39□□□□□ -0.43
CLDND1-218ENST00000508503 OGDHQ02218 1023 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 MAMLD1Q13495 774 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 TRIP6Q15654 476 aaKnown RBP12.39□□□□□ -0.43
CLDND1-218ENST00000508503 PIP5KL1Q5T9C9 394 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 E4F1Q66K89 784 aaPredicted RBP12.39□□□□□ -0.43
CLDND1-218ENST00000508503 TBC1D3GQ6DHY5 549 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 TBC1D3CQ6IPX1 549 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 DNAJC24Q6P3W2 148 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 C22orf39Q6P5X5 142 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 LINGO4Q6UY18 593 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 NAXDQ8IW45 347 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 DRC7Q8IY82 874 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 TBC1D3Q8IZP1 549 aaPredicted RBP12.39□□□□□ -0.43
CLDND1-218ENST00000508503 PCDH20Q8N6Y1 951 aaKnown RBP12.39□□□□□ -0.43
CLDND1-218ENST00000508503 CHST14Q8NCH0 376 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 TBC1D31Q96DN5 1066 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 CCDC114Q96M63 670 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 SPON2Q9BUD6 331 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 HDAC8Q9BY41 377 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 HAUS4Q9H6D7 363 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 NOL6Q9H6R4 1146 aaKnown RBP12.39□□□□□ -0.43
CLDND1-218ENST00000508503 ATP13A1Q9HD20 1204 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 PARVAQ9NVD7 372 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 PCOLCE2Q9UKZ9 415 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 FZD10Q9ULW2 581 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 DMTF1Q9Y222 760 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 WASF2Q9Y6W5 498 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 TMEM131Q92545 1883 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 CACNA1BQ00975 2339 aa12.39□□□□□ -0.43
CLDND1-218ENST00000508503 TMEM191CA6NGB0 347 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 H0Y8X5 98 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 DDX3XO00571 662 aaKnown RBP eCLIP12.38□□□□□ -0.43
CLDND1-218ENST00000508503 DKK1O94907 266 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 PRNPP04156 253 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 YBEYP58557 167 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-218ENST00000508503 PPP2CBP62714 309 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 PPP2CAP67775 309 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 SIM1P81133 766 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-218ENST00000508503 CCDC15Q0P6D6 951 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 SUZ12Q15022 739 aaKnown RBP12.38□□□□□ -0.43
CLDND1-218ENST00000508503 CARD16Q5EG05 197 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 ARSIQ5FYB1 569 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 SFMBT2Q5VUG0 894 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 DPY19L3Q6ZPD9 716 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 RAB44Q7Z6P3 723 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-218ENST00000508503 PRPF39Q86UA1 669 aaKnown RBP12.38□□□□□ -0.43
CLDND1-218ENST00000508503 IQCHQ86VS3 1027 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 UMODL1-AS1Q8N2C9 162 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 PYROXD2Q8N2H3 581 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 ARFGAP1Q8N6T3 406 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 MFSD2AQ8NA29 543 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 SYN2Q92777 582 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-218ENST00000508503 ARRDC3Q96B67 414 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 SKA1Q96BD8 255 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 SLC6A18Q96N87 628 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 MCEEQ96PE7 176 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 TMEM121BQ9BXQ6 578 aaPredicted RBP12.38□□□□□ -0.43
CLDND1-218ENST00000508503 ISCUQ9H1K1 167 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 ERVMER34-1Q9H9K5 563 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 PREBQ9HCU5 417 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 SEPT11Q9NVA2 429 aaKnown RBP12.38□□□□□ -0.43
CLDND1-218ENST00000508503 DNAI1Q9UI46 699 aa12.38□□□□□ -0.43
CLDND1-218ENST00000508503 ARID1BQ8NFD5 2236 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-218ENST00000508503 A0A1B0GTQ1 180 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 A0A1W2PQJ5 194 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 SYCE3A1L190 88 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 ANKRD62A6NC57 917 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 TLR4O00206 839 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 KCNK3O14649 394 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 FLRT2O43155 660 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 KDELR3O43731 214 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 RNGTTO60942 597 aaKnown RBP12.37□□□□□ -0.43
CLDND1-218ENST00000508503 TOP3BO95985 862 aaKnown RBP12.37□□□□□ -0.43
CLDND1-218ENST00000508503 FTLP02792 175 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-218ENST00000508503 HTR7P34969 479 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 RXRGP48443 463 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 GEMIN4P57678 1058 aaKnown RBP12.37□□□□□ -0.43
CLDND1-218ENST00000508503 FANCCQ00597 558 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 OVGP1Q12889 678 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 POLD3Q15054 466 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-218ENST00000508503 ASIC2Q16515 512 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 INO80DQ53TQ3 878 aaPredicted RBP12.37□□□□□ -0.43
CLDND1-218ENST00000508503 EFHC2Q5JST6 749 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 HGSNATQ68CP4 663 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 NAPEPLDQ6IQ20 393 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 RWDD4Q6NW29 188 aaKnown RBP12.37□□□□□ -0.43
CLDND1-218ENST00000508503 DCUN1D2Q6PH85 259 aa12.37□□□□□ -0.43
CLDND1-218ENST00000508503 LAYNQ6UX15 382 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms