RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 BNIP3LO60238 219 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 CLDN11O75508 207 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 ZMPSTE24O75844 475 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 ENDOD1O94919 500 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 LSM8O95777 96 aaKnown RBP13.46□□□□□ -0.25
DDX41-204ENST00000504807 UNGP13051 313 aaPredicted RBP13.46□□□□□ -0.25
DDX41-204ENST00000504807 ATP1A3P13637 1013 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 JUPP14923 745 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 ZNF18P17022 549 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 C5AR1P21730 350 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 SOX5P35711 763 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
DDX41-204ENST00000504807 ATP11AP98196 1134 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 CDR2Q01850 454 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 ZNF177Q13360 481 aaPredicted RBP13.46□□□□□ -0.25
DDX41-204ENST00000504807 SYCP1Q15431 976 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 MANEALQ5VSG8 457 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 SND1Q7KZF4 910 aaKnown RBP eCLIP13.46□□□□□ -0.25
DDX41-204ENST00000504807 TMPRSS12Q86WS5 348 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 SPATS2Q86XZ4 545 aaKnown RBP13.46□□□□□ -0.25
DDX41-204ENST00000504807 GATAD2AQ86YP4 633 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 CCDC117Q8IWD4 279 aaPredicted RBP13.46□□□□□ -0.25
DDX41-204ENST00000504807 SPACA3Q8IXA5 215 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 OR2A12Q8NGT7 310 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 SNIP1Q8TAD8 396 aaKnown RBP13.46□□□□□ -0.25
DDX41-204ENST00000504807 ARRDC3Q96B67 414 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 SPAG5Q96R06 1193 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 C11orf70Q9BRQ4 267 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 PDCL3Q9H2J4 239 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 TNKS2Q9H2K2 1166 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 LIMA1Q9UHB6 759 aaKnown RBP13.46□□□□□ -0.25
DDX41-204ENST00000504807 SCML1Q9UN30 329 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 HS3ST2Q9Y278 367 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 NCKAP1Q9Y2A7 1128 aa13.46□□□□□ -0.25
DDX41-204ENST00000504807 TCRBV5S1A1TA0A578 114 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 VILLO15195 856 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 PLRG1O43660 514 aaKnown RBP13.45□□□□□ -0.26
DDX41-204ENST00000504807 RNASEH1O60930 286 aaKnown RBP13.45□□□□□ -0.26
DDX41-204ENST00000504807 SRGAP2O75044 1071 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 ADH1BP00325 375 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 RHOCP08134 193 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 MAT2AP31153 395 aaKnown RBP13.45□□□□□ -0.26
DDX41-204ENST00000504807 CCR5P51681 352 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 RACK1P63244 317 aaKnown RBP13.45□□□□□ -0.26
DDX41-204ENST00000504807 ARF5P84085 180 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 ACCSLQ4AC99 568 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 CT47A1Q5JQC4 288 aaPredicted RBP13.45□□□□□ -0.26
DDX41-204ENST00000504807 PIP5KL1Q5T9C9 394 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 DNAAF5Q86Y56 855 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 CCDC185Q8N715 623 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 RXFP2Q8WXD0 754 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 C1orf74Q96LT6 269 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 MUC3BQ9H195 1237 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 STAP1Q9ULZ2 295 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 PCDHGB2Q9Y5G2 931 aa13.45□□□□□ -0.26
DDX41-204ENST00000504807 ANKRD17O75179 2603 aaKnown RBP13.44□□□□□ -0.26
DDX41-204ENST00000504807 A0A1B0GTQ1 180 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 C2CD4BA6NLJ0 364 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 LGALS16A8MUM7 142 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 MCF2LO15068 1137 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 ACVRL1P37023 503 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 HDAC4P56524 1084 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 RHDQ02161 417 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 SULT2A1Q06520 285 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 SUZ12Q15022 739 aaKnown RBP13.44□□□□□ -0.26
DDX41-204ENST00000504807 CDO1Q16878 200 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 ARHGAP40Q5TG30 622 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 IL27RAQ6UWB1 636 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 KDM7AQ6ZMT4 941 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 DCAF4L2Q8NA75 395 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 OR8D1Q8WZ84 308 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 KLK6Q92876 244 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 FGF11Q92914 225 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 WBP1Q96G27 269 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 RRN3Q9NYV6 651 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 TMEM63CQ9P1W3 806 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 IL17BQ9UHF5 180 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 SLC25A13Q9UJS0 675 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 DOCK9Q9BZ29 2069 aa13.44□□□□□ -0.26
DDX41-204ENST00000504807 DOCK4Q8N1I0 1966 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 KNTC1P50748 2209 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 TBC1D3DA0A087WVF3 549 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 TBC1D3IA0A087WXS9 549 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 TBC1D3EA0A087X179 549 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 TBC1D3KA0A087X1G2 549 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 TBC1D3FA6NER0 549 aaPredicted RBP13.43□□□□□ -0.26
DDX41-204ENST00000504807 LRRC72A6NJI9 287 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 TBC1D3LB9A6J9 549 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 PCDHGA12O60330 932 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 TBC1D3HP0C7X1 549 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 GKP32189 559 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 RFC1P35251 1148 aaPredicted RBP13.43□□□□□ -0.26
DDX41-204ENST00000504807 HNF1BP35680 557 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 ANP32AP39687 249 aaKnown RBP13.43□□□□□ -0.26
DDX41-204ENST00000504807 NXPH1P58417 271 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 BNIP3Q12983 259 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 TEAD4Q15561 434 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 CLEC16AQ2KHT3 1053 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 TBC1D3GQ6DHY5 549 aa13.43□□□□□ -0.26
DDX41-204ENST00000504807 TBC1D3CQ6IPX1 549 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms