RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 SP110Q9HB58 689 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 SPG21Q9NZD8 308 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 F5H5T6 163 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 IL10RBQ08334 325 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 SMAD1Q15797 465 aaKnown RBP21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 RNF43Q68DV7 783 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 PKN3Q6P5Z2 889 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 FBXO46Q6PJ61 603 aaPredicted RBP21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 LGI2Q8N0V4 545 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 ISL2Q96A47 359 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 ZNF778Q96MU6 729 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 KLHL5Q96PQ7 755 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 AGAP2Q99490 1192 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 RBBP8Q99708 897 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 MCMBPQ9BTE3 642 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 RETREG1Q9H6L5 497 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 ALG13Q9NP73 1137 aaKnown RBP21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 NT5MQ9NPB1 228 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 TRPM5Q9NZQ8 1165 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 MYLKQ15746 1914 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 TPP1O14773 563 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 KIAA0355O15063 1070 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 EFCAB14O75071 495 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 PMPCBO75439 489 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 OR1E1P30953 314 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 ALDH1A3P47895 512 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 HSP90AA5PQ58FG0 334 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 STXBP5Q5T5C0 1151 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 POTEHQ6S545 545 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 KCNMB4Q86W47 210 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 AZIN2Q96A70 460 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 PLD4Q96BZ4 506 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 MRM3Q9HC36 420 aaKnown RBP21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 ABCF3Q9NUQ8 709 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 KLHL14Q9P2G3 628 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 TXNDC16Q9P2K2 825 aa21.68■■□□□ 1.06
UBE2D3-216ENST00000503742 CARNS1A5YM72 827 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 FSBPO95073 299 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 MAGEA12P43365 314 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 HARS2P49590 506 aaKnown RBP21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 PTCD2Q8WV60 388 aaKnown RBP21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 PABPC5Q96DU9 382 aaKnown RBP21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 NACA2Q9H009 215 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 ACTR5Q9H9F9 607 aaPredicted RBP21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 ARNT2Q9HBZ2 717 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 ATP13A1Q9HD20 1204 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 C20orf96Q9NUD7 363 aaPredicted RBP21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 ANAPC1Q9H1A4 1944 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 KLF11O14901 512 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 URODP06132 367 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 MMP2P08253 660 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 ACVRL1P37023 503 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 SLC11A2P49281 568 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 LIMK2P53671 638 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 WNT3AP56704 352 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 PDE1CQ14123 709 aaPredicted RBP21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 RFWD3Q6PCD5 774 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 STRA8Q7Z7C7 330 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 PPM1EQ8WY54 764 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 TADA1Q96BN2 335 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 FSD1LQ9BXM9 530 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 VPS45Q9NRW7 570 aa21.67■■□□□ 1.06
UBE2D3-216ENST00000503742 MKI67P46013 3256 aaKnown RBP21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 IL1BP01584 269 aa21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 SPRP35270 261 aaPredicted RBP21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 LIG3P49916 1009 aa21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 ACTN3Q08043 901 aaPredicted RBP21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 POU6F1Q14863 301 aa21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 PDPK2PQ6A1A2 396 aa21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 ARMC2Q8NEN0 867 aa21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 NSMCE1Q8WV22 266 aa21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 RMDN2Q96LZ7 410 aa21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 TCAF1Q9Y4C2 921 aa21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 KIAA1671Q9BY89 1806 aa21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 PTPRSQ13332 1948 aa21.66■■□□□ 1.06
UBE2D3-216ENST00000503742 MIA3Q5JRA6 1907 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 PRAMEF11O60813 436 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 STC2O76061 302 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 TOP3BO95985 862 aaKnown RBP21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 KLKB1P03952 638 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 BGNP21810 368 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 CSE1LP55060 971 aaKnown RBP21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 MAXP61244 160 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 PDE1BQ01064 536 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 PLD1Q13393 1074 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 IHHQ14623 411 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 ARMC3Q5W041 872 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 KYAT3Q6YP21 454 aaKnown RBP21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 TCEAL8Q8IYN2 117 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 CFAP52Q8N1V2 620 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 PGBD5Q8N414 524 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 AUTS2Q8WXX7 1259 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 RNF38Q9H0F5 515 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 HAUS2Q9NVX0 235 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 SIRPGQ9P1W8 387 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 H3BNC9 293 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 PPP3CCP48454 512 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 ZNF354CQ86Y25 554 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 DENND1CQ8IV53 801 aa21.65■■□□□ 1.06
UBE2D3-216ENST00000503742 DCLK2Q8N568 766 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms