RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 LAMC2Q13753 1193 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 ZNF410Q86VK4 478 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 ZC3HC1Q86WB0 502 aaKnown RBP24.88■■□□□ 1.57
DDX41-202ENST00000503078 TMEM102Q8N9M5 508 aaPredicted RBP24.88■■□□□ 1.57
DDX41-202ENST00000503078 MARK4Q96L34 752 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 APOL2Q9BQE5 337 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 SENP6Q9GZR1 1112 aaPredicted RBP24.88■■□□□ 1.57
DDX41-202ENST00000503078 PIGVQ9NUD9 493 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 RNF19AQ9NV58 838 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 RUVBL2Q9Y230 463 aaKnown RBP24.88■■□□□ 1.57
DDX41-202ENST00000503078 FAM72CH0Y354 149 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 PHGDHO43175 533 aaKnown RBP24.88■■□□□ 1.57
DDX41-202ENST00000503078 USP10Q14694 798 aaKnown RBP24.88■■□□□ 1.57
DDX41-202ENST00000503078 KIZQ2M2Z5 673 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 Q3C1V9 767 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 ZNF618Q5T7W0 954 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 FAM72AQ5TYM5 149 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 FAM72DQ6L9T8 149 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 FAM72BQ86X60 149 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 WNT8BQ93098 351 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 RHOJQ9H4E5 214 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 NSMCE4AQ9NXX6 385 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 GJD2Q9UKL4 321 aa24.88■■□□□ 1.57
DDX41-202ENST00000503078 CNOT11Q9UKZ1 510 aaKnown RBP24.88■■□□□ 1.57
DDX41-202ENST00000503078 COPG1Q9Y678 874 aaKnown RBP24.88■■□□□ 1.57
DDX41-202ENST00000503078 POLR2AP24928 1970 aaKnown RBP24.87■■□□□ 1.57
DDX41-202ENST00000503078 NCAM2O15394 837 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 ZNF286BP0CG31 522 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 NMBRP28336 390 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 RANBP1P43487 201 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 PPP2R5DQ14738 602 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 SYPL2Q5VXT5 272 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 KCTD4Q8WVF5 259 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 DNAJC1Q96KC8 554 aaKnown RBP24.87■■□□□ 1.57
DDX41-202ENST00000503078 SLC2A11Q9BYW1 496 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 MYOCOSA0A1B0GUC4 107 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 TCAF2A6NFQ2 919 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 VAPBO95292 243 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 TPH1P17752 444 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 SLC12A1Q13621 1099 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 ALDH16A1Q8IZ83 802 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 FSTL5Q8N475 847 aaPredicted RBP24.87■■□□□ 1.57
DDX41-202ENST00000503078 TMA16Q96EY4 203 aaKnown RBP24.87■■□□□ 1.57
DDX41-202ENST00000503078 NPAS2Q99743 824 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 EIF2AQ9BY44 585 aaKnown RBP24.87■■□□□ 1.57
DDX41-202ENST00000503078 DNAI2Q9GZS0 605 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 PADI4Q9UM07 663 aa24.87■■□□□ 1.57
DDX41-202ENST00000503078 ARHGAP10A1A4S6 786 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 TARM1B6A8C7 271 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 IRF6O14896 467 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 SPTLC1O15269 473 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 SLC35E2BP0CK96 405 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 HOXA11P31270 313 aaPredicted RBP24.86■■□□□ 1.57
DDX41-202ENST00000503078 INHBCP55103 352 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 TBC1D25Q3MII6 688 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 ITPRIPL1Q6GPH6 555 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 SLC27A1Q6PCB7 646 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 APBA2Q99767 749 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 HSFX1Q9UBD0 423 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 TRHDEQ9UKU6 1024 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 PAPPA2Q9BXP8 1791 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 PIRO00625 290 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 TRIM38O00635 465 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 MTSS1O43312 755 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 RNASEH2AO75792 299 aaKnown RBP24.86■■□□□ 1.57
DDX41-202ENST00000503078 NFKB1P19838 968 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 ADRA1BP35368 520 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 PGGT1BP53609 377 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 NR1H2P55055 460 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 SH2D4BQ5SQS7 431 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 BORAQ6PGQ7 559 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 SLC2A13Q96QE2 648 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 DUSP16Q9BY84 665 aa24.86■■□□□ 1.57
DDX41-202ENST00000503078 UBQLN1Q9UMX0 589 aaKnown RBP24.86■■□□□ 1.57
DDX41-202ENST00000503078 COL6A2P12110 1019 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 AVPR1AP37288 418 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 ZBTB17Q13105 803 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 PTK2BQ14289 1009 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 LRRC8EQ6NSJ5 796 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 CENPLQ8N0S6 344 aaPredicted RBP24.85■■□□□ 1.57
DDX41-202ENST00000503078 APPL2Q8NEU8 664 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 EPS15L1Q9UBC2 864 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 RBPJLQ9UBG7 517 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 DICER1Q9UPY3 1922 aaKnown RBP24.85■■□□□ 1.57
DDX41-202ENST00000503078 DLX3O60479 287 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 TCN1P20061 433 aaPredicted RBP24.85■■□□□ 1.57
DDX41-202ENST00000503078 NDUFV1P49821 464 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 TPI1P60174 286 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 ADRM1Q16186 407 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 ALKAL1Q6UXT8 129 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 TNIP3Q96KP6 325 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 SLC9A7Q96T83 725 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 MRPL1Q9BYD6 325 aaKnown RBP24.85■■□□□ 1.57
DDX41-202ENST00000503078 BRD8Q9H0E9 1235 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 GDAP2Q9NXN4 497 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 CSADQ9Y600 493 aa24.85■■□□□ 1.57
DDX41-202ENST00000503078 CAPN15O75808 1086 aa24.84■■□□□ 1.57
DDX41-202ENST00000503078 ZNF26P17031 533 aaPredicted RBP24.84■■□□□ 1.57
DDX41-202ENST00000503078 DNAJB1P25685 340 aa24.84■■□□□ 1.57
DDX41-202ENST00000503078 USP46P62068 366 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms