RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 TREML2Q5T2D2 321 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 TMEM179Q6ZVK1 233 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 STRA8Q7Z7C7 330 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 TRIM8Q9BZR9 551 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 POLR3FQ9H1D9 316 aaPredicted RBP13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 PKD2L2Q9NZM6 624 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 MRPL11Q9Y3B7 192 aaKnown RBP13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 TCAF2A6NFQ2 919 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 EI24O14681 340 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 PHGDHO43175 533 aaKnown RBP13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 CDH8P55286 799 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 SPPL2CQ8IUH8 684 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 SLC4A11Q8NBS3 891 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 TSNARE1Q96NA8 513 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 OMDQ99983 421 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 GABBR1Q9UBS5 961 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 SLC39A10Q9ULF5 831 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 OAZ3Q9UMX2 235 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 TCRBV5S1A1TA0A578 114 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 NFIBO00712 420 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 GPC4O75487 556 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 DCKP27707 260 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 ELK4P28324 431 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 GBE1Q04446 702 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 ABRAXAS1Q6UWZ7 409 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 C15orf39Q6ZRI6 1047 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 ZNF534Q76KX8 674 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 SH3BP5LQ7L8J4 393 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 TMEM130Q8N3G9 435 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 RNF157Q96PX1 679 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 HGH1Q9BTY7 390 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 OSBPL10Q9BXB5 764 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 CCDC90BQ9GZT6 254 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 COA1Q9GZY4 146 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 PARVBQ9HBI1 364 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 NMRAL1Q9HBL8 299 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 ZBTB26Q9HCK0 441 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 RIC8BQ9NVN3 520 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 KLQ9UEF7 1012 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 CNOT11Q9UKZ1 510 aaKnown RBP13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 ERVK-11Q9UQG0 969 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 ANKRD12Q6UB98 2062 aa13.26□□□□□ -0.29
GAPVD1-220ENST00000497580 AURKAO14965 403 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 CNTFP26441 200 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 PIGFQ07326 219 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 TAS2R42Q7RTR8 314 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 PIGZQ86VD9 579 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 OR9I1Q8NGQ6 314 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 ACMSDQ8TDX5 336 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 ZNF669Q96BR6 464 aaPredicted RBP13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 ANKRD34BA5PLL1 514 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 CLDN25C9JDP6 229 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 GUCY1B2O75343 617 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 SLC7A1P30825 629 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 RGS7P49802 495 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 PRKAA2P54646 552 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 POLD3Q15054 466 aaPredicted RBP13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 TMC5Q6UXY8 1006 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 CAMK1DQ8IU85 385 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 SPNS2Q8IVW8 549 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 CMASQ8NFW8 434 aaPredicted RBP13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 AGAP2Q99490 1192 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 OLFM1Q99784 485 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 RAVER2Q9HCJ3 691 aaKnown RBP13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 ASNSD1Q9NWL6 643 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 FAM198AQ9UFP1 575 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 CNTNAP4Q9C0A0 1308 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 M0QYV0 167 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 CLASP2O75122 1294 aaKnown RBP13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 C8BP07358 591 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 PTPN9P43378 593 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 CREB5Q02930 508 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 CA9Q16790 459 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 TKFCQ3LXA3 575 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 TIFABQ6ZNK6 161 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 ZCCHC7Q8N3Z6 543 aaKnown RBP13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 DHRSXQ8N5I4 330 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 NIPA2Q8N8Q9 360 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 ABHD11Q8NFV4 315 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 ZNF420Q8TAQ5 688 aaPredicted RBP13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 RXFP2Q8WXD0 754 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 MAGEB5Q9BZ81 275 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 RNF38Q9H0F5 515 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 ST6GALNAC4Q9H4F1 302 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 COL20A1Q9P218 1284 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 IFT80Q9P2H3 777 aaPredicted RBP13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 FBXO40Q9UH90 709 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 PCDHGA7Q9Y5G6 932 aa13.25□□□□□ -0.29
GAPVD1-220ENST00000497580 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 SERPINB1P30740 379 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 HEATR6Q6AI08 1181 aaKnown RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 FNIP1Q8TF40 1166 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 LRRC39Q96DD0 335 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 PRMT6Q96LA8 375 aaPredicted RBP13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 SYBUQ9NX95 663 aa13.24□□□□□ -0.29
GAPVD1-220ENST00000497580 MRASO14807 208 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms