RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 IGF2-ASQ6U949 168 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 CCDC81Q6ZN84 652 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 BHLHA9Q7RTU4 235 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 SLC47A2Q86VL8 602 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 AADATQ8N5Z0 425 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.1□□□□□ -0.79
SRSF4-205ENST00000497015 TMEM35BQ8NCS4 154 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 MSANTD4Q8NCY6 345 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 C1orf131Q8NDD1 294 aaKnown RBP10.1□□□□□ -0.79
SRSF4-205ENST00000497015 OR2T34Q8NGX1 318 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 MRGPRX3Q96LB0 322 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 PSMG3-AS1Q96PY0 264 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 IRX2Q9BZI1 471 aaPredicted RBP10.1□□□□□ -0.79
SRSF4-205ENST00000497015 DCLK3Q9C098 648 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 FAM207AQ9NSI2 230 aaPredicted RBP10.1□□□□□ -0.79
SRSF4-205ENST00000497015 RASAL2Q9UJF2 1139 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 AJAP1Q9UKB5 411 aaPredicted RBP10.1□□□□□ -0.79
SRSF4-205ENST00000497015 CA5BQ9Y2D0 317 aa10.1□□□□□ -0.79
SRSF4-205ENST00000497015 HEMK1Q9Y5R4 338 aaPredicted RBP10.1□□□□□ -0.79
SRSF4-205ENST00000497015 UTP20O75691 2785 aaKnown RBP10.1□□□□□ -0.79
SRSF4-205ENST00000497015 LATO43561 262 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 SIN3BO75182 1162 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 LATS1O95835 1130 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 LTFP02788 710 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 TPM3P06753 285 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 DLDP09622 509 aaKnown RBP10.09□□□□□ -0.79
SRSF4-205ENST00000497015 CKMT1AP12532 417 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 TGM2P21980 687 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 DGKAP23743 735 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 METAP1P53582 386 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 ZNF445P59923 1031 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 ARID5AQ03989 594 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 MTA1Q13330 715 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 PDCLQ13371 301 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 NR1I3Q14994 352 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 BSPRYQ5W0U4 402 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 PPP1R2P3Q6NXS1 205 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 DENND1BQ6P3S1 775 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 TRIM72Q6ZMU5 477 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 RSRC2Q7L4I2 434 aaKnown RBP10.09□□□□□ -0.79
SRSF4-205ENST00000497015 TMC6Q7Z403 805 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 LUZP1Q86V48 1076 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 MMAAQ8IVH4 418 aaKnown RBP10.09□□□□□ -0.79
SRSF4-205ENST00000497015 MFSD2AQ8NA29 543 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 ZNF397Q8NF99 534 aaPredicted RBP10.09□□□□□ -0.79
SRSF4-205ENST00000497015 GANCQ8TET4 914 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 RNF139Q8WU17 664 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 EXTL1Q92935 676 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 SKA1Q96BD8 255 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 PLD4Q96BZ4 506 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 ATXN7L3BQ96GX2 97 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 NUCKS1Q9H1E3 243 aaKnown RBP10.09□□□□□ -0.79
SRSF4-205ENST00000497015 TSPY26PQ9H489 355 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 THSD1Q9NS62 852 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 SUN2Q9UH99 717 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 INTS6Q9UL03 887 aaKnown RBP10.09□□□□□ -0.79
SRSF4-205ENST00000497015 NCKAP1Q9Y2A7 1128 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 HBS1LQ9Y450 684 aaKnown RBP10.09□□□□□ -0.79
SRSF4-205ENST00000497015 ENTPD2Q9Y5L3 495 aa10.09□□□□□ -0.79
SRSF4-205ENST00000497015 YJEFN3A6XGL0 299 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 E7ENQ6 273 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 EPHB6O15197 1021 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 RNASEH2AO75792 299 aaKnown RBP10.08□□□□□ -0.8
SRSF4-205ENST00000497015 GABBR2O75899 941 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 CYBBP04839 570 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 FAM87AP0C7U9 286 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 PABPC1P11940 636 aaKnown RBP10.08□□□□□ -0.8
SRSF4-205ENST00000497015 LCP1P13796 627 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 FERP16591 822 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 SLC8A1P32418 973 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 GABRB2P47870 512 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 RGS7P49802 495 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 UBASH3AP57075 661 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 FANCCQ00597 558 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 CDR2Q01850 454 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 TLE1Q04724 770 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 TRIP4Q15650 581 aaPredicted RBP10.08□□□□□ -0.8
SRSF4-205ENST00000497015 CST6Q15828 149 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 OCLNQ16625 522 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 TSNAXIP1Q2TAA8 658 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 TTC31Q49AM3 519 aaPredicted RBP10.08□□□□□ -0.8
SRSF4-205ENST00000497015 MPPE1Q53F39 396 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 C4orf17Q53FE4 359 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 C3orf38Q5JPI3 329 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 EFHC1Q5JVL4 640 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 ARCQ7LC44 396 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 OR4C6Q8NH72 309 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 NDRG1Q92597 394 aaKnown RBP10.08□□□□□ -0.8
SRSF4-205ENST00000497015 PPP1R13BQ96KQ4 1090 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 APOLD1Q96LR9 279 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 DEPDC7Q96QD5 511 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 KCNK17Q96T54 332 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 PDCL3Q9H2J4 239 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 FBRSQ9HAH7 460 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 ACP6Q9NPH0 428 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 NLRC4Q9NPP4 1024 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 ST7Q9NRC1 585 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 RRN3Q9NYV6 651 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 MARCH2Q9P0N8 246 aa10.08□□□□□ -0.8
SRSF4-205ENST00000497015 GGA2Q9UJY4 613 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms