RNA–Protein interactions for RNA: ENST00000495462.5

RPN1-206, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-206ENST00000495462 BECN1Q14457 450 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 SMAD1Q15797 465 aaKnown RBP6.63□□□□□ -1.35
RPN1-206ENST00000495462 MEA1Q16626 185 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 MIIPQ5JXC2 388 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 AGBL4Q5VU57 503 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 OR6B2Q6IFH4 312 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 LINGO4Q6UY18 593 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 KDM7AQ6ZMT4 941 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 KANSL1Q7Z3B3 1105 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 ADAT2Q7Z6V5 191 aaKnown RBP6.63□□□□□ -1.35
RPN1-206ENST00000495462 ZNF683Q8IZ20 524 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 ATP6V0D2Q8N8Y2 350 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 KDM1BQ8NB78 822 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 CHST14Q8NCH0 376 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 OR2T34Q8NGX1 318 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 OR14C36Q8NHC7 312 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 HNRNPLLQ8WVV9 542 aaKnown RBP6.63□□□□□ -1.35
RPN1-206ENST00000495462 KLK6Q92876 244 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 RPRD1AQ96P16 312 aaPredicted RBP6.63□□□□□ -1.35
RPN1-206ENST00000495462 BBC3Q96PG8 261 aaPredicted RBP6.63□□□□□ -1.35
RPN1-206ENST00000495462 ELF4Q99607 663 aaPredicted RBP6.63□□□□□ -1.35
RPN1-206ENST00000495462 DDX50Q9BQ39 737 aaKnown RBP6.63□□□□□ -1.35
RPN1-206ENST00000495462 FEM1AQ9BSK4 669 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 ACE2Q9BYF1 805 aaPredicted RBP6.63□□□□□ -1.35
RPN1-206ENST00000495462 CCDC86Q9H6F5 360 aaKnown RBP6.63□□□□□ -1.35
RPN1-206ENST00000495462 FBRSQ9HAH7 460 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 AASDHPPTQ9NRN7 309 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.63□□□□□ -1.35
RPN1-206ENST00000495462 APEX2Q9UBZ4 518 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 DNAJC12Q9UKB3 198 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 PPM1HQ9ULR3 514 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 FZD4Q9ULV1 537 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 NCKAP1Q9Y2A7 1128 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 CEP83Q9Y592 693 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 CHD6Q8TD26 2715 aa6.63□□□□□ -1.35
RPN1-206ENST00000495462 SMG1Q96Q15 3661 aaKnown RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 TBC1D3DA0A087WVF3 549 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 TBC1D3IA0A087WXS9 549 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 TBC1D3EA0A087X179 549 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 TBC1D3KA0A087X1G2 549 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 A0A0D9SEW6 157 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 A0A1B0GVM2 712 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 A0A1W2PNR3 127 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 TBC1D3FA6NER0 549 aaPredicted RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 TCAF2A6NFQ2 919 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 TBC1D3LB9A6J9 549 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 M0QYT0 321 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 SART1O43290 800 aaKnown RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 TNFSF14O43557 240 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 PLRG1O43660 514 aaKnown RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 RNASEH1O60930 286 aaKnown RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 HSF2BPO75031 334 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 SDC3O75056 442 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 ZNF821O75541 412 aaPredicted RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 DAB1O75553 588 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 TBC1D3HP0C7X1 549 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 SRCP12931 536 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 MYF5P13349 255 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 C5AR1P21730 350 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 CD38P28907 300 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 CCR1P32246 355 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 NOS2P35228 1153 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 RDXP35241 583 aaKnown RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 FLT3P36888 993 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 GRK6P43250 576 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 CCR5P51681 352 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 NXPH1P58417 271 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 RNASE9P60153 205 aaKnown RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 CDK17Q00537 523 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 SLC6A3Q01959 620 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 ELAVL3Q14576 367 aaKnown RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 E2F5Q15329 346 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 DLG2Q15700 870 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 EXOC3L4Q17RC7 722 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 DPCR1Q3MIW9 517 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 C5orf22Q49AR2 442 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 TAF3Q5VWG9 929 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 RNF219Q5W0B1 726 aaPredicted RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 TBC1D3GQ6DHY5 549 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 TBC1D3CQ6IPX1 549 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 GBP6Q6ZN66 633 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 C11orf57Q6ZUT1 292 aaPredicted RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 SND1Q7KZF4 910 aaKnown RBP eCLIP6.62□□□□□ -1.352e-8■■■■□ 26.5
RPN1-206ENST00000495462 ENOSF1Q7L5Y1 443 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 PHLDB2Q86SQ0 1253 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 FAM71AQ8IYT1 594 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 TBC1D3Q8IZP1 549 aaPredicted RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 SH2D3CQ8N5H7 860 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 EID2Q8N6I1 236 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 RNF34Q969K3 372 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 VOPP1Q96AW1 172 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 ARRDC3Q96B67 414 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 ABHD17AQ96GS6 310 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 SERAC1Q96JX3 654 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 TBCBQ99426 244 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 NPY6RQ99463 290 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 CDC6Q99741 560 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 MYOCQ99972 504 aa6.62□□□□□ -1.35
RPN1-206ENST00000495462 ZCCHC2Q9C0B9 1178 aaKnown RBP6.62□□□□□ -1.35
RPN1-206ENST00000495462 TKTL2Q9H0I9 626 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms