RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 KRT14P02533 472 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 AHSGP02765 367 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 AFPP02771 609 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 FESP07332 822 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 GSTA1P08263 222 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PLEKP08567 350 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PAEPP09466 180 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PLA2G4BP0C869 781 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 MYBP10242 640 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 RARBP10826 455 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 RARGP13631 454 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 IL1R1P14778 569 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 EZRP15311 586 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 GAP43P17677 238 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 NR1D1P20393 614 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 KLRC1P26715 233 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PON1P27169 355 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 RPA1P27694 616 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CALRP27797 417 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CTNNA1P35221 906 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PSMC2P35998 433 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 WASP42768 502 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 RECQLP46063 649 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CRKLP46109 303 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PXNP49023 591 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 SLC18A1P54219 525 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PRKAG1P54619 331 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 SNRPFP62306 86 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 GPC5P78333 572 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 POU6F2P78424 691 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 POU5F1Q01860 360 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 NHLH1Q02575 133 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CAV1Q03135 178 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PPATQ06203 517 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 GFPT1Q06210 699 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CETN1Q12798 172 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 IFT88Q13099 833 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 GIT2Q14161 759 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 NEDD9Q14511 834 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 HLTFQ14527 1009 aaKnown RBP eCLIP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF268Q14587 947 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ITIH4Q14624 930 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PLS1Q14651 629 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CRYMQ14894 314 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PWP2Q15269 919 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ASIC2Q16515 512 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PTGISQ16647 500 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 EXOC3L4Q17RC7 722 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CERKLQ49MI3 558 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CCDC40Q4G0X9 1142 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ASPRV1Q53RT3 343 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CEP85LQ5SZL2 805 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 GPATCH4Q5T3I0 446 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ERMARDQ5T6L9 678 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 TEDDM1Q5T9Z0 273 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 NAA35Q5VZE5 725 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM160B1Q5W0V3 765 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 EGFLAMQ63HQ2 1017 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 TBC1D9BQ66K14 1250 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 HAUS3Q68CZ6 603 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 SLC9A4Q6AI14 798 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PPP4R4Q6NUP7 873 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PDXDC1Q6P996 788 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CRELD2Q6UXH1 353 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 STXBP4Q6ZWJ1 553 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 BRINP3Q76B58 766 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 TAOK1Q7L7X3 1001 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PEX26Q7Z412 305 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ADGRA1Q86SQ6 560 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 NT5DC3Q86UY8 548 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ZBTB46Q86UZ6 589 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 COL23A1Q86Y22 540 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ZC3H3Q8IXZ2 948 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CACNA2D3Q8IZS8 1091 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 CNPY4Q8N129 248 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 METTL13Q8N6R0 699 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ANKRD13CQ8N6S4 541 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF366Q8N895 744 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 GBP7Q8N8V2 638 aaPredicted RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 Q8NA96 180 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM98AQ8NCA5 519 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 KIAA0895Q8NCT3 520 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 BBOF1Q8ND07 529 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ERMNQ8TAM6 284 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 SLC35G2Q8TBE7 412 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 POC1BQ8TC44 478 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 BRIX1Q8TDN6 353 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF473Q8WTR7 871 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 TBC1D22AQ8WUA7 517 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 MAIP1Q8WWC4 291 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 RAPGEF5Q92565 580 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 RAD54LQ92698 747 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 RGMAQ96B86 450 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 SARAFQ96BY9 339 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 GRAMD1AQ96CP6 724 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 R3HDM4Q96D70 268 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 MTFMTQ96DP5 389 aaKnown RBP2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 PGM2Q96G03 612 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 HES6Q96HZ4 224 aa2.16□□□□□ -2.06
SNRNP40-207ENST00000491106 LRIG1Q96JA1 1093 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms