RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 USP29Q9HBJ7 922 aa10.63□□□□□ -0.71
CHKB-211ENST00000489453 RRN3Q9NYV6 651 aa10.63□□□□□ -0.71
CHKB-211ENST00000489453 APEX2Q9UBZ4 518 aa10.63□□□□□ -0.71
CHKB-211ENST00000489453 VPS51Q9UID3 782 aa10.63□□□□□ -0.71
CHKB-211ENST00000489453 STAP1Q9ULZ2 295 aa10.63□□□□□ -0.71
CHKB-211ENST00000489453 PCDHGC3Q9UN70 934 aa10.63□□□□□ -0.71
CHKB-211ENST00000489453 TBC1D30Q9Y2I9 924 aa10.63□□□□□ -0.71
CHKB-211ENST00000489453 PCDHB1Q9Y5F3 818 aa10.63□□□□□ -0.71
CHKB-211ENST00000489453 OR51B4Q9Y5P0 310 aa10.63□□□□□ -0.71
CHKB-211ENST00000489453 RP1P56715 2156 aa10.63□□□□□ -0.71
CHKB-211ENST00000489453 COL6A6A6NMZ7 2263 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 K7ERQ8 282 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 C1QL1O75973 258 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 CNTN5O94779 1100 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 ENDOD1O94919 500 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 MT-CO1P00395 513 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 ERBB2P04626 1255 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 GP1BAP07359 652 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 NEK3P51956 506 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 RNASE9P60153 205 aaKnown RBP10.62□□□□□ -0.71
CHKB-211ENST00000489453 RPS21P63220 83 aaKnown RBP10.62□□□□□ -0.71
CHKB-211ENST00000489453 CFHR1Q03591 330 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 DEUP1Q05D60 604 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 MORC3Q14149 939 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 EXOC3L4Q17RC7 722 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 ZNF542PQ5EBM4 170 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 ARSIQ5FYB1 569 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 SEL1L3Q68CR1 1132 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 KIAA1161Q6NSJ0 714 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 RETSATQ6NUM9 610 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 LINGO4Q6UY18 593 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 GCNT7Q6ZNI0 430 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 Q6ZSR6 202 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 SLC26A9Q7LBE3 791 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 TFAP2DQ7Z6R9 452 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 SETD3Q86TU7 594 aaPredicted RBP10.62□□□□□ -0.71
CHKB-211ENST00000489453 ZDHHC17Q8IUH5 632 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 DCAF4L2Q8NA75 395 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 CHST14Q8NCH0 376 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 OR2A12Q8NGT7 310 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 IFI44Q8TCB0 444 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 KCNE4Q8WWG9 221 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 IFT43Q96FT9 208 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 APOLD1Q96LR9 279 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 PSMB7Q99436 277 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 SPON2Q9BUD6 331 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 HDAC8Q9BY41 377 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 THSD1Q9NS62 852 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 PIGVQ9NUD9 493 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.62□□□□□ -0.71
CHKB-211ENST00000489453 NCKIPSDQ9NZQ3 722 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 CHD5Q8TDI0 1954 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 KALRNO60229 2985 aa10.62□□□□□ -0.71
CHKB-211ENST00000489453 BECN2A8MW95 431 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 ERVH48-1M5A8F1 160 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 NEMP1O14524 444 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 SCAMP1O15126 338 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 KLK10O43240 276 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 SMAD6O43541 496 aaKnown RBP10.61□□□□□ -0.71
CHKB-211ENST00000489453 LEFTY1O75610 366 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 F9P00740 461 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 MYF5P13349 255 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 PLA2G2AP14555 144 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 SLC9A1P19634 815 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 RBMS1P29558 406 aaKnown RBP10.61□□□□□ -0.71
CHKB-211ENST00000489453 OR1E1P30953 314 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 MTIF2P46199 727 aaKnown RBP10.61□□□□□ -0.71
CHKB-211ENST00000489453 ERVPABLB-1P60509 514 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 RHDQ02161 417 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 SGCGQ13326 291 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 BECN1Q14457 450 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 C5orf22Q49AR2 442 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 PTPN20Q4JDL3 420 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 ALFQ53S48 1182 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 ACBD5Q5T8D3 534 aaPredicted RBP10.61□□□□□ -0.71
CHKB-211ENST00000489453 ARHGAP40Q5TG30 622 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 CDCP2Q5VXM1 449 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 OLFML1Q6UWY5 402 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 KYAT3Q6YP21 454 aaKnown RBP10.61□□□□□ -0.71
CHKB-211ENST00000489453 ABI3BPQ7Z7G0 1075 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 ZSCAN30Q86W11 494 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 PARGQ86W56 976 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 ZNF843Q8N446 348 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 RYBPQ8N488 228 aaPredicted RBP10.61□□□□□ -0.71
CHKB-211ENST00000489453 WDTC1Q8N5D0 677 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 GLMNQ92990 594 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 FEM1CQ96JP0 617 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 SLC17A9Q9BYT1 436 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 POLR1BQ9H9Y6 1135 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 TMEM51Q9NW97 253 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 ZFR2Q9UPR6 939 aaKnown RBP10.61□□□□□ -0.71
CHKB-211ENST00000489453 SNX10Q9Y5X0 201 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 HS3ST3A1Q9Y663 406 aa10.61□□□□□ -0.71
CHKB-211ENST00000489453 A0A0D9SEW6 157 aa10.6□□□□□ -0.71
CHKB-211ENST00000489453 CPED1A4D0V7 1026 aa10.6□□□□□ -0.71
CHKB-211ENST00000489453 K7ESM1 405 aa10.6□□□□□ -0.71
CHKB-211ENST00000489453 RIOK3O14730 519 aaKnown RBP10.6□□□□□ -0.71
CHKB-211ENST00000489453 FPGTO14772 594 aa10.6□□□□□ -0.71
CHKB-211ENST00000489453 SRGAP2O75044 1071 aa10.6□□□□□ -0.71
CHKB-211ENST00000489453 NEBLO76041 1014 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms