RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 FAM131BQ86XD5 332 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 SLC25A45Q8N413 288 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 EPS8L1Q8TE68 723 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 SLC20A1Q8WUM9 679 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 CCDC114Q96M63 670 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 MYOCQ99972 504 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 HDAC8Q9BY41 377 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 NUP62CLQ9H1M0 184 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 GANQ9H2C0 597 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 CAAP1Q9H8G2 361 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 TAB2Q9NYJ8 693 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 IL36AQ9UHA7 158 aa12.47□□□□□ -0.41
VPS16-208ENST00000487461 ZFR2Q9UPR6 939 aaKnown RBP12.47□□□□□ -0.41
VPS16-208ENST00000487461 NYNRINQ9P2P1 1898 aaKnown RBP12.46□□□□□ -0.41
VPS16-208ENST00000487461 COL5A1P20908 1838 aaPredicted RBP12.46□□□□□ -0.41
VPS16-208ENST00000487461 ASXL3Q9C0F0 2248 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 TRIM38O00635 465 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 LEFTY1O75610 366 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 GFPT2O94808 682 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 CYP1A1P04798 512 aaPredicted RBP12.46□□□□□ -0.41
VPS16-208ENST00000487461 THEGLP0DJG4 465 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 CDK4P11802 303 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 EEF1GP26641 437 aaKnown RBP12.46□□□□□ -0.41
VPS16-208ENST00000487461 KLK7P49862 253 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 ATP11AP98196 1134 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 SLC20A2Q08357 652 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 CCDC15Q0P6D6 951 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 CCDC14Q49A88 953 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 CT47A1Q5JQC4 288 aaPredicted RBP12.46□□□□□ -0.41
VPS16-208ENST00000487461 C22orf39Q6P5X5 142 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 FBXL19Q6PCT2 694 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 ZNF783Q6ZMS7 281 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 ERN2Q76MJ5 926 aaKnown RBP12.46□□□□□ -0.41
VPS16-208ENST00000487461 PDZD3Q86UT5 571 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 EMC1Q8N766 993 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 GRIN3AQ8TCU5 1115 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 MAGEB5Q9BZ81 275 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 ZYG11BQ9C0D3 744 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 VPS16Q9H269 839 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 ATP13A1Q9HD20 1204 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 FZD3Q9NPG1 666 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 DYRK4Q9NR20 520 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 METTL5Q9NRN9 209 aaKnown RBP12.46□□□□□ -0.41
VPS16-208ENST00000487461 KLHL11Q9NVR0 708 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 NOCTQ9UK39 431 aaKnown RBP12.46□□□□□ -0.41
VPS16-208ENST00000487461 ACTL7AQ9Y615 435 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 WASF2Q9Y6W5 498 aa12.46□□□□□ -0.41
VPS16-208ENST00000487461 CELSR3Q9NYQ7 3312 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 SIGLEC6O43699 453 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 PCDH8O95206 1070 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 GJB6O95452 261 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 CD160O95971 181 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 CKMT2P17540 419 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 ADRA1BP35368 520 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 ACVRL1P37023 503 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 RECQLP46063 649 aaPredicted RBP12.45□□□□□ -0.42
VPS16-208ENST00000487461 SERPINH1P50454 418 aaKnown RBP12.45□□□□□ -0.42
VPS16-208ENST00000487461 DNA2P51530 1060 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 CLDN2P57739 230 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 ARF5P84085 180 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 FMO1Q01740 532 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 GNA12Q03113 381 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 TARDBPQ13148 414 aaKnown RBP eCLIP12.45□□□□□ -0.42
VPS16-208ENST00000487461 C15orf59Q2T9L4 293 aaPredicted RBP12.45□□□□□ -0.42
VPS16-208ENST00000487461 PROX2Q3B8N5 592 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 CARD16Q5EG05 197 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 HES3Q5TGS1 186 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 SEL1L3Q68CR1 1132 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 RETSATQ6NUM9 610 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 DRC7Q8IY82 874 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 MSANTD4Q8NCY6 345 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 OR13H1Q8NG92 308 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 SLC30A5Q8TAD4 765 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 ENOX1Q8TC92 643 aaKnown RBP12.45□□□□□ -0.42
VPS16-208ENST00000487461 RXFP2Q8WXD0 754 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 HEPHQ9BQS7 1158 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 CEP44Q9C0F1 390 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 NDFIP2Q9NV92 336 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 UCKL1Q9NWZ5 548 aa12.45□□□□□ -0.42
VPS16-208ENST00000487461 PPARGC1AQ9UBK2 798 aaKnown RBP12.45□□□□□ -0.42
VPS16-208ENST00000487461 FCF1Q9Y324 198 aaKnown RBP12.45□□□□□ -0.42
VPS16-208ENST00000487461 TP53BP1Q12888 1972 aaPredicted RBP12.45□□□□□ -0.42
VPS16-208ENST00000487461 FAM72CH0Y354 149 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 EPHB6O15197 1021 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 GIMD1P0DJR0 217 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 HNRNPA2B1P22626 353 aaKnown RBP12.44□□□□□ -0.42
VPS16-208ENST00000487461 MMP8P22894 467 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 DGKAP23743 735 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 AKT2P31751 481 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 HNF1BP35680 557 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 SOX5P35711 763 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 JAM2P57087 298 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 POLR2FP61218 127 aaKnown RBP12.44□□□□□ -0.42
VPS16-208ENST00000487461 CDR2Q01850 454 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 ZNF211Q13398 564 aaPredicted RBP12.44□□□□□ -0.42
VPS16-208ENST00000487461 ILKQ13418 452 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 FGL2Q14314 439 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 KRT31Q15323 416 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 CDO1Q16878 200 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms