RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 TTC12Q9H892 705 aaPredicted RBP3.84□□□□□ -1.79
SNRNP27-204ENST00000487029 TMEM248Q9NWD8 314 aa3.84□□□□□ -1.79
SNRNP27-204ENST00000487029 TNFSF13BQ9Y275 285 aa3.84□□□□□ -1.79
SNRNP27-204ENST00000487029 ITIH6Q6UXX5 1313 aa3.84□□□□□ -1.79
SNRNP27-204ENST00000487029 TMEM247A6NEH6 219 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 FAM90A8PA6NJQ4 464 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 C17orf100A8MU93 164 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 TSPAN4O14817 238 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 HBP1O60381 514 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 HLA-DQA2P01906 255 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 FAM90A13PP0C7W8 464 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 FAM90A24PP0C7X0 464 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 CYP19A1P11511 503 aaPredicted RBP3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 TFEBP19484 476 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 HOXA7P31268 230 aaPredicted RBP3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 GGT5P36269 586 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 GJC1P36383 396 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 PAFAH1B1P43034 410 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 MTNR1AP48039 350 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 YPEL5P62699 121 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 HSF1Q00613 529 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 RHAGQ02094 409 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 TDGQ13569 410 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 IL13RA2Q14627 380 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 AP5B1Q2VPB7 878 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 HYIQ5T013 277 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 GJB7Q6PEY0 223 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 SLC22A25Q6T423 547 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 C1orf122Q6ZSJ8 110 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 ARMC8Q8IUR7 673 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 TNIP2Q8NFZ5 429 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 NOC3LQ8WTT2 800 aaKnown RBP3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 RUFY2Q8WXA3 655 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 MAP4K1Q92918 833 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 ELP4Q96EB1 424 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 FAM118BQ9BPY3 351 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 TRMOQ9BU70 441 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 CADM1Q9BY67 442 aaKnown RBP3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 Q9N2J8 555 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 MLXIPLQ9NP71 852 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 BEX4Q9NWD9 120 aaPredicted RBP3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 PPP1R14DQ9NXH3 145 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 UPB1Q9UBR1 384 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 SLC8A2Q9UPR5 921 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 OSGIN2Q9Y236 505 aa3.83□□□□□ -1.8
SNRNP27-204ENST00000487029 SLC22A23A1A5C7 686 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 GAGE10A6NGK3 116 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 TNPO2O14787 897 aaKnown RBP3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 SPTLC2O15270 562 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 STRNO43815 780 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 BAIAP3O94812 1187 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 RTN3O95197 1032 aaPredicted RBP3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 TOMM40O96008 361 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 F9P00740 461 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 CRYABP02511 175 aaKnown RBP3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 CD63P08962 238 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 CASP2P42575 452 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 RXRGP48443 463 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 SLC12A2P55011 1212 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 CDH15P55291 814 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 ZBTB16Q05516 673 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 ZNF268Q14587 947 aaPredicted RBP3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 PRICKLE4Q2TBC4 344 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 ZNF766Q5HY98 468 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 FAM69AQ5T7M9 428 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 VWA5B1Q5TIE3 1220 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 TBC1D1Q86TI0 1168 aaPredicted RBP3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 SCAIQ8N9R8 606 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 ZNF548Q8NEK5 533 aaPredicted RBP3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 BCAS4Q8TDM0 211 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 RAB40AQ8WXH6 277 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 IP6K1Q92551 441 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 CNOT9Q92600 299 aaKnown RBP3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 C7orf26Q96N11 449 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 EYA3Q99504 573 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 CLSTN3Q9BQT9 956 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 LMAN2LQ9H0V9 348 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 EPHX3Q9H6B9 360 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 OLA1Q9NTK5 396 aaKnown RBP3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 HCN3Q9P1Z3 774 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 HDAC6Q9UBN7 1215 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 SLC25A10Q9UBX3 287 aaPredicted RBP3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 IPO11Q9UI26 975 aaKnown RBP3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 FBXO4Q9UKT5 387 aa3.82□□□□□ -1.8
SNRNP27-204ENST00000487029 A0A1W2PPH5 198 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 TCRBV7S3A2A0A539 114 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 OR6C68A6NDL8 312 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 C2CD4BA6NLJ0 364 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 TEX22C9J3V5 150 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 PER2O15055 1255 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 MSI1O43347 362 aaKnown RBP3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 TMEM63AO94886 807 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 NFATC1O95644 943 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 CHRM4P08173 479 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 PSG1P11464 419 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 FCGR2AP12318 317 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 CAPN3P20807 821 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 MAN1A1P33908 653 aa3.81□□□□□ -1.8
SNRNP27-204ENST00000487029 CYP2J2P51589 502 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms