RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-210	ENST00000485424	SAMSN1	Q9NSI8	373 aa	Known RBP	13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	TAB2	Q9NYJ8	693 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	MPP6	Q9NZW5	540 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	VPS51	Q9UID3	782 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	SARDH	Q9UL12	918 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	PPM1H	Q9ULR3	514 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	HS3ST2	Q9Y278	367 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	SNX10	Q9Y5X0	201 aa		13.56	□□□□□ -0.24
UBA3-210	ENST00000485424	SNAP91	O60641	907 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	RNGTT	O60942	597 aa	Known RBP	13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	GFPT2	O94808	682 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	PCDH8	O95206	1070 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	MME	P08473	750 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	TFE3	P19532	575 aa	Predicted RBP	13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	RRM1	P23921	792 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	ABCG1	P45844	678 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	EMP3	P54852	163 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	ATP11A	P98196	1134 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	KCNMA1	Q12791	1236 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	SYCP1	Q15431	976 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	CDO1	Q16878	200 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	HES3	Q5TGS1	186 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	AGBL4	Q5VU57	503 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	SFMBT2	Q5VUG0	894 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	KANSL1	Q7Z3B3	1105 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	NOP9	Q86U38	636 aa	Known RBP	13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	IQCH	Q86VS3	1027 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	ZNF677	Q86XU0	584 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	CPA5	Q8WXQ8	436 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	TSC1	Q92574	1164 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	FAM131C	Q96AQ9	280 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	CFAP57	Q96MR6	1250 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	HAPLN3	Q96S86	360 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	VPS16	Q9H269	839 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	ERVMER34-1	Q9H9K5	563 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	ATP13A1	Q9HD20	1204 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	METTL5	Q9NRN9	209 aa	Known RBP	13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	IL36A	Q9UHA7	158 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	OR51B4	Q9Y5P0	310 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424	ZNF462	Q96JM2	2506 aa		13.55	□□□□□ -0.24
UBA3-210	ENST00000485424		F8VZ95	297 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	SLC31A1	O15431	190 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	TLX3	O43711	291 aa	Predicted RBP	13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	C1S	P09871	688 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	JUP	P14923	745 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	AKT2	P31751	481 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	FLT3	P36888	993 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	ETFB	P38117	255 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	ANP32A	P39687	249 aa	Known RBP	13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	DNA2	P51530	1060 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	NOMO3	P69849	1222 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	BNIP3	Q12983	259 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	C2CD6	Q53TS8	623 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	OTUD1	Q5VV17	481 aa	Predicted RBP	13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	NEK5	Q6P3R8	708 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	C22orf39	Q6P5X5	142 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	FBXL19	Q6PCT2	694 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	LINGO4	Q6UY18	593 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	ZNF783	Q6ZMS7	281 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	FAM131B	Q86XD5	332 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	SPATS2	Q86XZ4	545 aa	Known RBP	13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	DRC7	Q8IY82	874 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	TMIE	Q8NEW7	156 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	GRIN3A	Q8TCU5	1115 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	EPS8L1	Q8TE68	723 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	KLK6	Q92876	244 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	NT5C3B	Q969T7	300 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	PSMB7	Q99436	277 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	MYOC	Q99972	504 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	ZYG11B	Q9C0D3	744 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	TNKS2	Q9H2K2	1166 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	ARHGAP20	Q9P2F6	1191 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424	HPCAL4	Q9UM19	191 aa		13.54	□□□□□ -0.24
UBA3-210	ENST00000485424		A0A0D9SEW6	157 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424		A0A1W2PQU0	124 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	ILVBL	A1L0T0	632 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	DRGX	A6NNA5	263 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	ENDOD1	O94919	500 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	MT-CO1	P00395	513 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	ITPKB	P27987	946 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	SDC4	P31431	198 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	RXRG	P48443	463 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	POLR2F	P61218	127 aa	Known RBP	13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	SLC20A2	Q08357	652 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	ARSI	Q5FYB1	569 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	RWDD4	Q6NW29	188 aa	Known RBP	13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	ERN2	Q76MJ5	926 aa	Known RBP	13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	ZNF354C	Q86Y25	554 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	RYBP	Q8N488	228 aa	Predicted RBP	13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	OR7D4	Q8NG98	312 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	OR2A12	Q8NGT7	310 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	CALN1	Q9BXU9	219 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	NLRC4	Q9NPP4	1024 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	ANLN	Q9NQW6	1124 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	TMPRSS4	Q9NRS4	437 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	SEPT11	Q9NVA2	429 aa	Known RBP	13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	DAAM1	Q9Y4D1	1078 aa		13.53	□□□□□ -0.24
UBA3-210	ENST00000485424	PIEZO2	Q9H5I5	2752 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms