RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 SEPT11Q9NVA2 429 aaKnown RBP4.73□□□□□ -1.65
XPA-203ENST00000485042 ASNSD1Q9NWL6 643 aa4.73□□□□□ -1.65
XPA-203ENST00000485042 LRIT1Q9P2V4 623 aa4.73□□□□□ -1.65
XPA-203ENST00000485042 ADD3Q9UEY8 706 aaKnown RBP4.73□□□□□ -1.65
XPA-203ENST00000485042 ST3GAL5Q9UNP4 418 aa4.73□□□□□ -1.65
XPA-203ENST00000485042 HEMK1Q9Y5R4 338 aaPredicted RBP4.73□□□□□ -1.65
XPA-203ENST00000485042 METP08581 1390 aa4.73□□□□□ -1.65
XPA-203ENST00000485042 ADGRL2O95490 1459 aa4.73□□□□□ -1.65
XPA-203ENST00000485042 ANKRD50Q9ULJ7 1429 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 LAMC1P11047 1609 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 ADAMTS20P59510 1910 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 A0A0G2JLL6 359 aaPredicted RBP4.72□□□□□ -1.65
XPA-203ENST00000485042 TEX13CA0A0J9YWL9 993 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 CCDC151A5D8V7 595 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 LINC00473A8K010 186 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 DSCR3O14972 297 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 PER2O15055 1255 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 TNFSF14O43557 240 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 HBP1O60381 514 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 CCNDBP1O95273 360 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 LAMP2P13473 410 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 APEHP13798 732 aaKnown RBP4.72□□□□□ -1.65
XPA-203ENST00000485042 COX7A2P14406 83 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 HOXB9P17482 250 aaPredicted RBP4.72□□□□□ -1.65
XPA-203ENST00000485042 HOXA5P20719 270 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 RRM1P23921 792 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 NFKBIAP25963 317 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 ABCD1P33897 745 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 ACTN2P35609 894 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 ARL1P40616 181 aaPredicted RBP4.72□□□□□ -1.65
XPA-203ENST00000485042 OAZ1P54368 228 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 IL13RA2Q14627 380 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 PTPAQ15257 358 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 AARS2Q5JTZ9 985 aaKnown RBP4.72□□□□□ -1.65
XPA-203ENST00000485042 TMEM65Q6PI78 240 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 RNF207Q6ZRF8 634 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 RHOUQ7L0Q8 258 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 RNF144BQ7Z419 303 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 DEFB132Q7Z7B7 95 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 GALNT5Q7Z7M9 940 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 GALNT7Q86SF2 657 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 ADGRF3Q8IZF5 1079 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 TERB1Q8NA31 727 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 USP6NLQ92738 828 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 CAVIN3Q969G5 261 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 C20orf173Q96LM9 149 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 CLSTN3Q9BQT9 956 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 MLST8Q9BVC4 326 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 FTOQ9C0B1 505 aaKnown RBP eCLIP4.72□□□□□ -1.65
XPA-203ENST00000485042 SYNCQ9H7C4 482 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 IL1RAPL1Q9NZN1 696 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 PIK3R4Q99570 1358 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 GLI3P10071 1580 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.72□□□□□ -1.65
XPA-203ENST00000485042 CLTCL1P53675 1640 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 ATRNO75882 1429 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 DCCP43146 1447 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 ADGRL3Q9HAR2 1447 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 KDM3AQ9Y4C1 1321 aa4.72□□□□□ -1.65
XPA-203ENST00000485042 C1orf167Q5SNV9 1468 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 NPIPB15A6NHN6 443 aaPredicted RBP4.71□□□□□ -1.66
XPA-203ENST00000485042 PRYO14603 147 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 CNTN5O94779 1100 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 MLYCDO95822 493 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 ADH4P08319 380 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 HKR1P10072 659 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 SFPQP23246 707 aaKnown RBP eCLIP4.71□□□□□ -1.66
XPA-203ENST00000485042 HOXD12P35452 270 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 CPA2P48052 419 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 EFNB1P98172 346 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 KCNB1Q14721 858 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 WTAPQ15007 396 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 SLC9B1Q4ZJI4 515 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 GLE1Q53GS7 698 aaKnown RBP4.71□□□□□ -1.66
XPA-203ENST00000485042 TMEM63BQ5T3F8 832 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 NAPEPLDQ6IQ20 393 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 DBX2Q6ZNG2 339 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 DCDC5Q6ZRR9 648 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 IKBIPQ70UQ0 350 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 ZNF804AQ7Z570 1209 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 BCDIN3DQ7Z5W3 292 aaKnown RBP4.71□□□□□ -1.66
XPA-203ENST00000485042 MRGPREQ86SM8 312 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 RPAP2Q8IXW5 612 aaPredicted RBP4.71□□□□□ -1.66
XPA-203ENST00000485042 LINC01465Q8N7H1 131 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 ACTRT2Q8TDY3 377 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 C2CD4CQ8TF44 421 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 CACTINQ8WUQ7 758 aaKnown RBP4.71□□□□□ -1.66
XPA-203ENST00000485042 RAB40AQ8WXH6 277 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 PIP5K1AQ99755 562 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 LBHD1Q9BQE6 289 aaPredicted RBP4.71□□□□□ -1.66
XPA-203ENST00000485042 SLC32A1Q9H598 525 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 CYP4F11Q9HBI6 524 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 NKIRAS2Q9NYR9 191 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 MPP6Q9NZW5 540 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 PEMTQ9UBM1 199 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 CNOT11Q9UKZ1 510 aaKnown RBP4.71□□□□□ -1.66
XPA-203ENST00000485042 ZNF215Q9UL58 517 aaPredicted RBP4.71□□□□□ -1.66
XPA-203ENST00000485042 PKP3Q9Y446 797 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 LYVE1Q9Y5Y7 322 aa4.71□□□□□ -1.66
XPA-203ENST00000485042 LRP5O75197 1615 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms