RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 TFE3P19532 575 aaPredicted RBP13.19□□□□□ -0.3
UBR4-213ENST00000483922 AKT2P31751 481 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 GCNT1Q02742 428 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 EIF2B5Q13144 721 aaKnown RBP13.19□□□□□ -0.3
UBR4-213ENST00000483922 LINGO4Q6UY18 593 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 EFL1Q7Z2Z2 1120 aaKnown RBP13.19□□□□□ -0.3
UBR4-213ENST00000483922 HDAC8Q9BY41 377 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 ABCG4Q9H172 646 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 GDPD2Q9HCC8 539 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 TMPRSS4Q9NRS4 437 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 THSD1Q9NS62 852 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 DDIT4Q9NX09 232 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 VPS51Q9UID3 782 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 VPS28Q9UK41 221 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 WASF2Q9Y6W5 498 aa13.19□□□□□ -0.3
UBR4-213ENST00000483922 KIF26BQ2KJY2 2108 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 SPTA1P02549 2419 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.18□□□□□ -0.3
UBR4-213ENST00000483922 EME2A4GXA9 379 aaPredicted RBP13.18□□□□□ -0.3
UBR4-213ENST00000483922 BECN2A8MW95 431 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 SLC28A2O43868 658 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 NOBOXO60393 691 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 PAGE1O75459 146 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 GCATO75600 419 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 LETM1O95202 739 aaPredicted RBP13.18□□□□□ -0.3
UBR4-213ENST00000483922 PCDH8O95206 1070 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 ADCY5O95622 1261 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 NME1P15531 152 aaKnown RBP13.18□□□□□ -0.3
UBR4-213ENST00000483922 CCR1P32246 355 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 ACADSBP45954 432 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 SRSF1Q07955 248 aaKnown RBP eCLIP13.18□□□□□ -0.3
UBR4-213ENST00000483922 SRSF6Q13247 344 aaKnown RBP13.18□□□□□ -0.3
UBR4-213ENST00000483922 ZNF177Q13360 481 aaPredicted RBP13.18□□□□□ -0.3
UBR4-213ENST00000483922 PDCLQ13371 301 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 DEFB133Q30KQ1 61 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 ARL13BQ3SXY8 428 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 RABGAP1LQ5R372 815 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 TTC39BQ5VTQ0 682 aaPredicted RBP13.18□□□□□ -0.3
UBR4-213ENST00000483922 ISM2Q6H9L7 571 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 DPY19L3Q6ZPD9 716 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 ERN2Q76MJ5 926 aaKnown RBP13.18□□□□□ -0.3
UBR4-213ENST00000483922 FMR1NBQ8N0W7 255 aaPredicted RBP13.18□□□□□ -0.3
UBR4-213ENST00000483922 ATP11CQ8NB49 1132 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 CPXM1Q96SM3 734 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 SLC17A9Q9BYT1 436 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 TNKS2Q9H2K2 1166 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 FAM204AQ9H8W3 233 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 USP29Q9HBJ7 922 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 PCDHGA8Q9Y5G5 932 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 FADS3Q9Y5Q0 445 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 ACTL7AQ9Y615 435 aa13.18□□□□□ -0.3
UBR4-213ENST00000483922 NBPF19A0A087WUL8 3843 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 NEMP2A6NFY4 417 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 DRGXA6NNA5 263 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 SART1O43290 800 aaKnown RBP13.17□□□□□ -0.3
UBR4-213ENST00000483922 CLDN11O75508 207 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 LEFTY1O75610 366 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 ZMPSTE24O75844 475 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 ENDOD1O94919 500 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 CD160O95971 181 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 ALPPL2P10696 532 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 ITGB6P18564 788 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 BMP6P22004 513 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 DUSP3P51452 185 aaPredicted RBP13.17□□□□□ -0.3
UBR4-213ENST00000483922 OXCT1P55809 520 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 HNRNPKP61978 463 aaKnown RBP eCLIP13.17□□□□□ -0.3
UBR4-213ENST00000483922 KRT85P78386 507 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 APBA1Q02410 837 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 LRRC63Q05C16 580 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
UBR4-213ENST00000483922 ZCCHC8Q6NZY4 707 aaKnown RBP13.17□□□□□ -0.3
UBR4-213ENST00000483922 GJB7Q6PEY0 223 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 KYAT3Q6YP21 454 aaKnown RBP13.17□□□□□ -0.3
UBR4-213ENST00000483922 NYAP1Q6ZVC0 841 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 CLEC14AQ86T13 490 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 RBFAQ8N0V3 343 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 MED15Q96RN5 788 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 TSG101Q99816 390 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 DUSP23Q9BVJ7 150 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 SIK2Q9H0K1 926 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 ZNF212Q9UDV6 495 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 SLC12A6Q9UHW9 1150 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 GGT7Q9UJ14 662 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 SALL4Q9UJQ4 1053 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 CSNK1G3Q9Y6M4 447 aa13.17□□□□□ -0.3
UBR4-213ENST00000483922 RP1P56715 2156 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 A6NNZ2 444 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 AQP9O43315 295 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 GKP32189 559 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 CDH4P55283 916 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 CDK17Q00537 523 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 NFKB2Q00653 900 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 NME3Q13232 169 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 C1orf61Q13536 156 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 TGIF1Q15583 401 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 MEA1Q16626 185 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 HS1BP3Q53T59 392 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 TTI2Q6NXR4 508 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 FOXR1Q6PIV2 292 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 FAM183BPQ6ZVS7 135 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms