RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 FBXW11Q9UKB1 542 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 A0A1W2PQH9 124 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 NEMP2A6NFY4 417 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 FAM159BA6NKW6 160 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 SUPT3HB4E1H0 165 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 KIF3CO14782 793 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 SNX2O60749 519 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 SIN3BO75182 1162 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 SUPT3HO75486 399 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 OAS1P00973 400 aaKnown RBP9.28□□□□□ -0.92
CALD1-220ENST00000482470 CCDC166P0CW27 439 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 PRKCHP24723 683 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 CCR10P46092 362 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 CXCR3P49682 368 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 SLC5A3P53794 718 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 WNT3AP56704 352 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 MRPS22P82650 360 aaKnown RBP9.28□□□□□ -0.92
CALD1-220ENST00000482470 MRPS35P82673 323 aaKnown RBP9.28□□□□□ -0.92
CALD1-220ENST00000482470 DSG1Q02413 1049 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 WASHC5Q12768 1159 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 FOXD4Q12950 439 aaPredicted RBP9.28□□□□□ -0.92
CALD1-220ENST00000482470 GRB14Q14449 540 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 PCID2Q5JVF3 399 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 MFSD4BQ5TF39 518 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 AGAP9Q5VTM2 703 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 ARHGAP36Q6ZRI8 547 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 CIR1Q86X95 450 aaPredicted RBP9.28□□□□□ -0.92
CALD1-220ENST00000482470 PLD6Q8N2A8 252 aaKnown RBP9.28□□□□□ -0.92
CALD1-220ENST00000482470 NXNL1Q96CM4 212 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 GATA5Q9BWX5 397 aaPredicted RBP9.28□□□□□ -0.92
CALD1-220ENST00000482470 UBE2OQ9C0C9 1292 aaKnown RBP9.28□□□□□ -0.92
CALD1-220ENST00000482470 MUC3BQ9H195 1237 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 ABCC13Q9NSE7 274 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 MIOSQ9NXC5 875 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 NSMCE4AQ9NXX6 385 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 AFF4Q9UHB7 1163 aaKnown RBP9.28□□□□□ -0.92
CALD1-220ENST00000482470 FBXO5Q9UKT4 447 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 FAM50BQ9Y247 325 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 SLC4A7Q9Y6M7 1214 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 KLHL33A6NCF5 533 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 CBX4O00257 560 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 BIRC5O15392 142 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 RAMP2O60895 175 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 RHOBTB1O94844 696 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 TGDSO95455 350 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 ASGR1P07306 291 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 MLNP12872 115 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 RAG1P15918 1043 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 CHRM3P20309 590 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 RENBPP51606 427 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 SLC18A1P54219 525 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 ATN1P54259 1190 aaPredicted RBP9.28□□□□□ -0.92
CALD1-220ENST00000482470 BTKQ06187 659 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 ZBTB17Q13105 803 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.28□□□□□ -0.92
CALD1-220ENST00000482470 OR52K2Q8NGK3 314 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 CALML6Q8TD86 181 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 ACMSDQ8TDX5 336 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 EME1Q96AY2 570 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 TMEM209Q96SK2 561 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 NPY6RQ99463 290 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 ALG9Q9H6U8 611 aa9.28□□□□□ -0.92
CALD1-220ENST00000482470 TRMT13Q9NUP7 481 aaKnown RBP9.28□□□□□ -0.92
CALD1-220ENST00000482470 PFDN6O15212 129 aa9.27□□□□□ -0.92
CALD1-220ENST00000482470 TBX10O75333 385 aa9.27□□□□□ -0.92
CALD1-220ENST00000482470 AMHP03971 560 aa9.27□□□□□ -0.92
CALD1-220ENST00000482470 ALDOAP04075 364 aaKnown RBP9.27□□□□□ -0.92
CALD1-220ENST00000482470 T-ENOLP0DO92 83 aa9.27□□□□□ -0.92
CALD1-220ENST00000482470 WARSP23381 471 aaKnown RBP9.27□□□□□ -0.92
CALD1-220ENST00000482470 PBX3P40426 434 aa9.27□□□□□ -0.92
CALD1-220ENST00000482470 RPL14P50914 215 aaKnown RBP9.27□□□□□ -0.92
CALD1-220ENST00000482470 TBCCQ15814 346 aa9.27□□□□□ -0.92
CALD1-220ENST00000482470 ARL13AQ5H913 290 aaPredicted RBP9.27□□□□□ -0.92
CALD1-220ENST00000482470 CYP2R1Q6VVX0 501 aa9.27□□□□□ -0.92
CALD1-220ENST00000482470 ATP6V0D2Q8N8Y2 350 aa9.27□□□□□ -0.92
CALD1-220ENST00000482470 VAT1Q99536 393 aa9.27□□□□□ -0.92
CALD1-220ENST00000482470 UPF3AQ9H1J1 476 aaKnown RBP9.27□□□□□ -0.92
CALD1-220ENST00000482470 PIF1Q9H611 641 aa9.27□□□□□ -0.92
CALD1-220ENST00000482470 RRN3Q9NYV6 651 aa9.27□□□□□ -0.92
CALD1-220ENST00000482470 RNF103-CHMP3A0A140T963 221 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 SEC24DO94855 1032 aaPredicted RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 APOA4P06727 396 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 PRKAA1Q13131 559 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 POLD3Q15054 466 aaPredicted RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 ZRANB3Q5FWF4 1079 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 LPCAT4Q643R3 524 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 TMEM198Q66K66 360 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 GDF6Q6KF10 455 aaPredicted RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 TIGD7Q6NT04 549 aaPredicted RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 IYDQ6PHW0 289 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 C16orf89Q6UX73 402 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 BNC2Q6ZN30 1099 aaPredicted RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 RNF180Q86T96 592 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 KYQ8NBH2 561 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 SMG8Q8ND04 991 aaKnown RBP9.27□□□□□ -0.93
CALD1-220ENST00000482470 CDC26Q8NHZ8 85 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 CXorf38Q8TB03 319 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 HDAC10Q969S8 669 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 TUBGCP3Q96CW5 907 aa9.27□□□□□ -0.93
CALD1-220ENST00000482470 FCRL3Q96P31 734 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms