RNA–Protein interactions for RNA: ENST00000479113.1

RPN1-203, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-203ENST00000479113 MIB1Q86YT6 1006 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 RBM12BQ8IXT5 1001 aaKnown RBP4.37□□□□□ -1.71
RPN1-203ENST00000479113 CAMKK1Q8N5S9 505 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 KBTBD7Q8WVZ9 684 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 HMGB4Q8WW32 186 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 GAB3Q8WWW8 586 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 DDX1Q92499 740 aaKnown RBP4.37□□□□□ -1.71
RPN1-203ENST00000479113 PIGKQ92643 395 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 TAF4BQ92750 862 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 ERLEC1Q96DZ1 483 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 C8orf48Q96LL4 319 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 CEP295NLQ96MC4 621 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 XPO6Q96QU8 1125 aaKnown RBP4.37□□□□□ -1.71
RPN1-203ENST00000479113 KCNK16Q96T55 309 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 SYT3Q9BQG1 590 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 B3GNT5Q9BYG0 378 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 SMYD3Q9H7B4 428 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 HPS4Q9NQG7 708 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 TLR8Q9NR97 1041 aaKnown RBP4.37□□□□□ -1.71
RPN1-203ENST00000479113 FAM49BQ9NUQ9 324 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 POLR3BQ9NW08 1133 aaPredicted RBP4.37□□□□□ -1.71
RPN1-203ENST00000479113 RMND1Q9NWS8 449 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 DEC1Q9P2X7 70 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 RCOR1Q9UKL0 485 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 ARHGAP26Q9UNA1 814 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 NCANO14594 1321 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 PTPRJQ12913 1337 aa4.37□□□□□ -1.71
RPN1-203ENST00000479113 VWA8A3KMH1 1905 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 TCRBV5S2A0A599 114 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 TCRBV21S2A2A0A5A6 115 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 E2F8A0AVK6 867 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 MED19A0JLT2 244 aaPredicted RBP4.36□□□□□ -1.71
RPN1-203ENST00000479113 TCAF2A6NFQ2 919 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 OTOL1A6NHN0 477 aaPredicted RBP4.36□□□□□ -1.71
RPN1-203ENST00000479113 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 FAM47E-STBD1D6RA91 191 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 NEDD8-MDP1E9PL57 170 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 K7ESF4 209 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 PDXKO00764 312 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 PLD2O14939 933 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 DCLK1O15075 740 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 COCHO43405 550 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 SYNCRIPO60506 623 aaKnown RBP4.36□□□□□ -1.71
RPN1-203ENST00000479113 BUB1BO60566 1050 aaPredicted RBP4.36□□□□□ -1.71
RPN1-203ENST00000479113 TLR5O60602 858 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 LRP3O75074 770 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 NDUFS2O75306 463 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 KAT7O95251 611 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 ASMTLO95671 621 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 CAVIN2O95810 425 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 HLA-DRAP01903 254 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 CFIP05156 583 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 FAM163BP0C2L3 166 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 NCAM1P13591 858 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 CD19P15391 556 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 PFKLP17858 780 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 HOXD13P35453 343 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 ATP5C1P36542 298 aaKnown RBP4.36□□□□□ -1.71
RPN1-203ENST00000479113 MPLP40238 635 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 WASP42768 502 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 LIMS1P48059 325 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 NDUFA8P51970 172 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 LINC00310P59036 64 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 SLC7A9P82251 487 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 CETN1Q12798 172 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 PKP1Q13835 747 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 DHCR24Q15392 516 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 SF3A2Q15428 464 aaKnown RBP4.36□□□□□ -1.71
RPN1-203ENST00000479113 CCDC40Q4G0X9 1142 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 EOGTQ5NDL2 527 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 C10orf76Q5T2E6 689 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 DAB2IPQ5VWQ8 1189 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 NAIF1Q69YI7 327 aaPredicted RBP4.36□□□□□ -1.71
RPN1-203ENST00000479113 GRAMD4Q6IC98 578 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 SPOPLQ6IQ16 392 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 PKN3Q6P5Z2 889 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 TPGS1Q6ZTW0 290 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 LPCAT2Q7L5N7 544 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 SYT13Q7L8C5 426 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 TMEM150AQ86TG1 271 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 CCDC117Q8IWD4 279 aaPredicted RBP4.36□□□□□ -1.71
RPN1-203ENST00000479113 CHPFQ8IZ52 775 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 FAM26EQ8N5C1 309 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 ALLCQ8N6M5 410 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 C12orf29Q8N999 325 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 TXNDC5Q8NBS9 432 aaKnown RBP4.36□□□□□ -1.71
RPN1-203ENST00000479113 SCAMP5Q8TAC9 235 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 PARD3BQ8TEW8 1205 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 RNF139Q8WU17 664 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 CPA5Q8WXQ8 436 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 OVCA2Q8WZ82 227 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 GOLGA1Q92805 767 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 CYFIP2Q96F07 1278 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 EEF2KMTQ96G04 330 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 SIGLEC10Q96LC7 697 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 GTPBP2Q9BX10 602 aaKnown RBP4.36□□□□□ -1.71
RPN1-203ENST00000479113 BBS2Q9BXC9 721 aa4.36□□□□□ -1.71
RPN1-203ENST00000479113 NUSAP1Q9BXS6 441 aaKnown RBP4.36□□□□□ -1.71
RPN1-203ENST00000479113 RNF38Q9H0F5 515 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms