RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 CKAP5Q14008 2032 aa14.93□□□□□ -0.02
USP11-207ENST00000478596 UTP20O75691 2785 aaKnown RBP14.92□□□□□ -0.02
USP11-207ENST00000478596 NUMA1Q14980 2115 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 A0A1W2PR77 199 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 TIMM44O43615 452 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 GRAP2O75791 330 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 LTFP02788 710 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 ITGB2P05107 769 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 RALAP11233 206 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 CD38P28907 300 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 MAGEA1P43355 309 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 INHBCP55103 352 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 DAOAP59103 153 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 YWHAGP61981 247 aaKnown RBP eCLIP14.92□□□□□ -0.02
USP11-207ENST00000478596 CCZ1BP86790 482 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 CCZ1P86791 482 aaPredicted RBP14.92□□□□□ -0.02
USP11-207ENST00000478596 RAB41Q5JT25 222 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 FYB2Q5VWT5 728 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 Q6ZNB5 142 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 XYLT1Q86Y38 959 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 RNF139Q8WU17 664 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 IRGQQ8WZA9 623 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 ZNF830Q96NB3 372 aaPredicted RBP14.92□□□□□ -0.02
USP11-207ENST00000478596 THAP2Q9H0W7 228 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 CTTNBP2NLQ9P2B4 639 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 SCML2Q9UQR0 700 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 ABCA12Q86UK0 2595 aa14.92□□□□□ -0.02
USP11-207ENST00000478596 A0A1W2PQH9 124 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 LZTS3O60299 673 aaPredicted RBP14.91□□□□□ -0.02
USP11-207ENST00000478596 HSF2BPO75031 334 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 CCDC175P0C221 793 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 RRM1P23921 792 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 GALCP54803 685 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 NAP1L1P55209 391 aaKnown RBP14.91□□□□□ -0.02
USP11-207ENST00000478596 NXPH1P58417 271 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 RPS14P62263 151 aaKnown RBP14.91□□□□□ -0.02
USP11-207ENST00000478596 SLC6A3Q01959 620 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 ZNF211Q13398 564 aaPredicted RBP14.91□□□□□ -0.02
USP11-207ENST00000478596 ASTE1Q2TB18 679 aaPredicted RBP14.91□□□□□ -0.02
USP11-207ENST00000478596 TTC31Q49AM3 519 aaPredicted RBP14.91□□□□□ -0.02
USP11-207ENST00000478596 EFHC1Q5JVL4 640 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 OLFML1Q6UWY5 402 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 TADA2BQ86TJ2 420 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 TMEM110Q86TL2 294 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 NDRG1Q92597 394 aaKnown RBP14.91□□□□□ -0.02
USP11-207ENST00000478596 SLC46A1Q96NT5 459 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 MCEEQ96PE7 176 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 PACSIN1Q9BY11 444 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 TMEM245Q9H330 911 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 EBF2Q9HAK2 575 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 MRPL47Q9HD33 250 aaKnown RBP14.91□□□□□ -0.02
USP11-207ENST00000478596 PARVAQ9NVD7 372 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 PCDHA13Q9Y5I0 950 aa14.91□□□□□ -0.02
USP11-207ENST00000478596 C10orf142B7Z368 130 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 TLR4O00206 839 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 OPA1O60313 960 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 CSO75390 466 aaKnown RBP14.9□□□□□ -0.02
USP11-207ENST00000478596 DAB1O75553 588 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 TBX18O95935 607 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 DNTTP04053 509 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 TMEM253P0C7T8 217 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 GABRB2P47870 512 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 PGFP49763 221 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 PSEN1P49768 467 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 C10orf120Q5SQS8 335 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 TMEM215Q68D42 235 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 C3orf20Q8ND61 904 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 SORCS1Q8WY21 1168 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 EDEM1Q92611 657 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 CCNL2Q96S94 520 aaPredicted RBP14.9□□□□□ -0.02
USP11-207ENST00000478596 CDK5RAP1Q96SZ6 601 aaKnown RBP14.9□□□□□ -0.02
USP11-207ENST00000478596 NUP85Q9BW27 656 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 CIPCQ9C0C6 399 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 ISCUQ9H1K1 167 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 FAM204AQ9H8W3 233 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 POPDC2Q9HBU9 364 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 AASDHPPTQ9NRN7 309 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 RASAL2Q9UJF2 1139 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 DOPEY1Q5JWR5 2465 aa14.9□□□□□ -0.02
USP11-207ENST00000478596 SYNJ2BP-COX16A0A087WUM0 186 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 YJEFN3A6XGL0 299 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 E7ENQ6 273 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 TRIM38O00635 465 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 SIGLEC6O43699 453 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 GJB6O95452 261 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 KRT3P12035 628 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 RARGP13631 454 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 RBMS1P29558 406 aaKnown RBP14.89□□□□□ -0.03
USP11-207ENST00000478596 ATP5C1P36542 298 aaKnown RBP14.89□□□□□ -0.03
USP11-207ENST00000478596 NOP2P46087 812 aaKnown RBP14.89□□□□□ -0.03
USP11-207ENST00000478596 VAV2P52735 878 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 CLN3Q13286 438 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 KLHDC10Q6PID8 442 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 USP30Q70CQ3 517 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 SLC26A9Q7LBE3 791 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 ARHGAP9Q9BRR9 750 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 KCNF1Q9H3M0 494 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 OLA1Q9NTK5 396 aaKnown RBP14.89□□□□□ -0.03
USP11-207ENST00000478596 COX16Q9P0S2 106 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 STAP1Q9ULZ2 295 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms