RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TMEM145Q8NBT3 493 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 CHST14Q8NCH0 376 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 ZNF548Q8NEK5 533 aaPredicted RBP6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 OR52K2Q8NGK3 314 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 LMX1AQ8TE12 382 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 CCDC97Q96F63 343 aaPredicted RBP6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 MED8Q96G25 268 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 WBP1Q96G27 269 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 HIC2Q96JB3 615 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 MED15Q96RN5 788 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 IL12RB2Q99665 862 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 PRMT1Q99873 361 aaKnown RBP6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 FEM1AQ9BSK4 669 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 THAP9Q9H5L6 903 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 SYNCQ9H7C4 482 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 GDPD2Q9HCC8 539 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 METTL14Q9HCE5 456 aaKnown RBP6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 EPB41L5Q9HCM4 733 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 ASCL3Q9NQ33 180 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 IL36AQ9UHA7 158 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 MAST4O15021 2626 aa6.84□□□□□ -1.31
RTFDC1-206ENST00000477485 SCN8AQ9UQD0 1980 aa6.84□□□□□ -1.32
RTFDC1-206ENST00000477485 LRP4O75096 1905 aa6.84□□□□□ -1.32
RTFDC1-206ENST00000477485 PMS2P1A4D2B8 440 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 GOLGA6L4A6NEF3 574 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 POM121BA6NF01 834 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 M0QYT0 321 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 FPGTO14772 594 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 PSMA7O14818 248 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 SCAMP1O15126 338 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 AQP9O43315 295 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 SMAD6O43541 496 aaKnown RBP6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 PAGE1O75459 146 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 CLDN11O75508 207 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 DXOO77932 396 aaKnown RBP6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 CNTN5O94779 1100 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 SMC2O95347 1197 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 WISP1O95388 367 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 PAK4O96013 591 aaPredicted RBP6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 MT-CO1P00395 513 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 JUNDP17535 347 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 NEK3P51956 506 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 THOP1P52888 689 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 PLK1P53350 603 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 RPS21P63220 83 aaKnown RBP6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 SGCGQ13326 291 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 PDCLQ13371 301 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 C1orf61Q13536 156 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 SPIDRQ14159 915 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 NR0B2Q15466 257 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 ARHGAP44Q17R89 818 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 NEK5Q6P3R8 708 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 C22orf39Q6P5X5 142 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 ERN2Q76MJ5 926 aaKnown RBP6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 TFAP2DQ7Z6R9 452 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 PARGQ86W56 976 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 DCP2Q8IU60 420 aaKnown RBP6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 TTC9Q92623 222 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 GLMNQ92990 594 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 SMARCE1Q969G3 411 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 SNX21Q969T3 373 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 SPON2Q9BUD6 331 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 C2orf49Q9BVC5 232 aaPredicted RBP6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 SLC17A9Q9BYT1 436 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 ZDHHC6Q9H6R6 413 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 USP29Q9HBJ7 922 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 UBE2TQ9NPD8 197 aaPredicted RBP6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 ACP6Q9NPH0 428 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 NCKIPSDQ9NZQ3 722 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 VPS51Q9UID3 782 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 DOLKQ9UPQ8 538 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 ZFR2Q9UPR6 939 aaKnown RBP6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 ENTPD2Q9Y5L3 495 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 HS3ST4Q9Y661 456 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 NAV2Q8IVL1 2488 aa6.83□□□□□ -1.32
RTFDC1-206ENST00000477485 HECTD1Q9ULT8 2610 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 CCDC187A0A096LP49 1063 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 LY6G6EA0A0G2JKS1 128 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 A0A1W2PQ27 194 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 A0A1W2PQ64 194 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 C10orf142B7Z368 130 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 K7ENP7 123 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 RNF103O00237 685 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 HSF2BPO75031 334 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 SRGAP2O75044 1071 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 LEFTY1O75610 366 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 IGLV3-25P01717 112 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 CSF2P04141 144 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 ANXA6P08133 673 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 GIMD1P0DJR0 217 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 ADRB3P13945 408 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 OR1E1P30953 314 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 RABIFP47224 123 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 RPIAP49247 311 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 SULT1E1P49888 294 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 ADKP55263 362 aaKnown RBP6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 CDH4P55283 916 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 RNASE9P60153 205 aaKnown RBP6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 NFKB2Q00653 900 aa6.82□□□□□ -1.32
RTFDC1-206ENST00000477485 GCNT1Q02742 428 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms