RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SLC27A5Q9Y2P5 690 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CFAP54Q96N23 3096 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 TPRP12270 2363 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 MAGEA13PA6NCF6 341 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 PABPN1LA6NDY0 278 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 KPNA7A9QM74 516 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 E7ENQ6 273 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ACKR2O00590 384 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 KIF1CO43896 1103 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 FKTNO75072 461 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 C2P06681 752 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ZBTB48P10074 688 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 VDRP11473 427 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ATP6V1C1P21283 382 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 PIK3R1P27986 724 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SPRP35270 261 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ASPAP45381 313 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 GALNT3Q14435 633 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 LAPTM4AQ15012 233 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 DDR2Q16832 855 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SLC10A6Q3KNW5 377 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 BOLA3Q53S33 107 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SFT2D3Q587I9 215 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 MFSD5Q6N075 450 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 DPY19L2P1Q6NXN4 242 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CLVS1Q8IUQ0 354 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 ARFGAP1Q8N6T3 406 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 PHC3Q8NDX5 983 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 NXNL1Q96CM4 212 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 THAP11Q96EK4 314 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 IFT43Q96FT9 208 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 KCTD15Q96SI1 283 aaPredicted RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 LRMDAQ9H2I8 198 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 POMKQ9H5K3 350 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 NOL11Q9H8H0 719 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 NMRAL1Q9HBL8 299 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 PCDH12Q9NPG4 1184 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SLC2A6Q9UGQ3 507 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 SLC24A2Q9UI40 661 aa5.07□□□□□ -1.6
CCDC39-204ENST00000476379 HBS1LQ9Y450 684 aaKnown RBP5.07□□□□□ -1.6
CCDC39-204ENST00000476379 CACNA1GO43497 2377 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 CROCCQ5TZA2 2017 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 ZSWIM8A7E2V4 1837 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 KANSL1LA0AUZ9 987 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 GRXCR1A8MXD5 290 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 FAM72CH0Y354 149 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 TOR1BO14657 336 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 GSTA4O15217 222 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 MAGEB3O15480 346 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 BEST1O76090 585 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 SNUPNO95149 360 aaKnown RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 SIX3O95343 332 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 LYNP07948 512 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 HOXC6P09630 235 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 RGS2P41220 211 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 SLC10A2Q12908 348 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 CDC16Q13042 620 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 GTF2H3Q13889 308 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 CYLC2Q14093 348 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 LBRQ14739 615 aaKnown RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 GRIK4Q16099 956 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 PFKFB4Q16877 469 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 ARL13BQ3SXY8 428 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 ARL13AQ5H913 290 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 FSCBQ5H9T9 825 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 FAM72AQ5TYM5 149 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 FAM72DQ6L9T8 149 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 PACS1Q6VY07 963 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 BNC2Q6ZN30 1099 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 C16orf59Q7L2K0 433 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 FAM72BQ86X60 149 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 PHF13Q86YI8 300 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 BANPQ8N9N5 519 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 GIPC2Q8TF65 315 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 DCAKDQ8WVC6 231 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 RELTQ969Z4 430 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 RPRD1AQ96P16 312 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 CSPG4P5Q96PW8 444 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 PCYT2Q99447 389 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 LATS2Q9NRM7 1088 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 ARHGEF37A1IGU5 675 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 E5RI56 91 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 ANGPT2O15123 496 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 LMNAP02545 664 aaKnown RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 FAM200BP0CF97 657 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 CCDC166P0CW27 439 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 CYP4B1P13584 511 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 XRCC1P18887 633 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 YWHAQP27348 245 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 EEF1DP29692 281 aaKnown RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 HOXA7P31268 230 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 ZNF143P52747 638 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-204ENST00000476379 SLC6A3Q01959 620 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 FOLH1Q04609 750 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 GRM3Q14832 879 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 PDK3Q15120 406 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 PPP1R3AQ16821 1122 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 DNAL1Q4LDG9 190 aa5.06□□□□□ -1.6
CCDC39-204ENST00000476379 PERM1Q5SV97 790 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 876.9 ms