RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 OGDHQ02218 1023 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 ZNF252P-AS1Q0IIN9 211 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 AUHQ13825 339 aaKnown RBP16.01■□□□□ 0.15
CPSF3-203ENST00000475482 PPP2R5EQ16537 467 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 SLC25A52Q3SY17 297 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 BRMS1LQ5PSV4 323 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 DAB2IPQ5VWQ8 1189 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 TRNP1Q6NT89 227 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 CCDC117Q8IWD4 279 aaPredicted RBP16.01■□□□□ 0.15
CPSF3-203ENST00000475482 RCOR2Q8IZ40 523 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 APCDD1Q8J025 514 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 EXD1Q8NHP7 514 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 C1orf216Q8TAB5 229 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 UBXN4Q92575 508 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 GPR174Q9BXC1 333 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 ERVW-1Q9UQF0 538 aa16.01■□□□□ 0.15
CPSF3-203ENST00000475482 SYNJ2BP-COX16A0A087WUM0 186 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 C10orf142B7Z368 130 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 CCDC188H7C350 402 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 PRPSAP2O60256 369 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 LRCH4O75427 683 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 PAGE1O75459 146 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 KCNK5O95279 499 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 F9P00740 461 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 ACADMP11310 421 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 FLT3P36888 993 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 CTSOP43234 321 aaPredicted RBP16■□□□□ 0.15
CPSF3-203ENST00000475482 IRAK1P51617 712 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 COPS2P61201 443 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 ECT2LQ008S8 904 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 NME3Q13232 169 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 BOLA3Q53S33 107 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 WDR45BQ5MNZ6 344 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 RABGAP1LQ5R372 815 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 SYCP2LQ5T4T6 812 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 C9orf64Q5T6V5 341 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 STRADAQ7RTN6 431 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 C14orf80Q86SX3 495 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 ALG3Q92685 438 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 KRT35Q92764 455 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 TBCBQ99426 244 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 MTG2Q9H4K7 406 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 COX16Q9P0S2 106 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 SUSD2Q9UGT4 822 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 TBC1D30Q9Y2I9 924 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 OR51B4Q9Y5P0 310 aa16■□□□□ 0.15
CPSF3-203ENST00000475482 CHD5Q8TDI0 1954 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 TARSL2A2RTX5 802 aaKnown RBP15.99■□□□□ 0.15
CPSF3-203ENST00000475482 UPK3BL1B0FP48 263 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 UPK3BL2E5RIL1 263 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 SIN3BO75182 1162 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 ENDOD1O94919 500 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 CSRP1P21291 193 aaKnown RBP15.99■□□□□ 0.15
CPSF3-203ENST00000475482 MZF1P28698 734 aaPredicted RBP15.99■□□□□ 0.15
CPSF3-203ENST00000475482 ACSL1P33121 698 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 OXCT1P55809 520 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 ST8SIA6P61647 398 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 LONRF2Q1L5Z9 754 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 CCDC14Q49A88 953 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 CIR1Q86X95 450 aaPredicted RBP15.99■□□□□ 0.15
CPSF3-203ENST00000475482 CCDC50Q8IVM0 306 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 OR52K2Q8NGK3 314 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 FAM172AQ8WUF8 416 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 PTPRN2Q92932 1015 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 RNF34Q969K3 372 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 C1orf74Q96LT6 269 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 CFAP57Q96MR6 1250 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 WDCPQ9H6R7 721 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 SLCO3A1Q9UIG8 710 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 VANGL2Q9ULK5 521 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 SCML1Q9UN30 329 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 CHD8Q9HCK8 2581 aa15.99■□□□□ 0.15
CPSF3-203ENST00000475482 DRGXA6NNA5 263 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 TTC34A8MYJ7 566 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 ARHGAP33O14559 1287 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 CTIFO43310 598 aaKnown RBP15.98■□□□□ 0.15
CPSF3-203ENST00000475482 CLDN11O75508 207 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 GJB3O75712 270 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 FGGP02679 453 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 KRT1P04264 644 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 CFIP05156 583 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 MAOBP27338 520 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 MIPP30301 263 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 MARCKSL1P49006 195 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 SULT1E1P49888 294 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 TAS2R40P59535 323 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 ATP11AP98196 1134 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 SULT2A1Q06520 285 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 SEMA3BQ13214 749 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 CDO1Q16878 200 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 ACBD5Q5T8D3 534 aaPredicted RBP15.98■□□□□ 0.15
CPSF3-203ENST00000475482 N4BP2L1Q5TBK1 243 aaPredicted RBP15.98■□□□□ 0.15
CPSF3-203ENST00000475482 DCAF12L1Q5VU92 463 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 ZNF776Q68DI1 518 aaPredicted RBP15.98■□□□□ 0.15
CPSF3-203ENST00000475482 USP30Q70CQ3 517 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 SND1Q7KZF4 910 aaKnown RBP eCLIP15.98■□□□□ 0.15
CPSF3-203ENST00000475482 CACUL1Q86Y37 369 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 MAP7D3Q8IWC1 876 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 SPATA4Q8NEY3 305 aa15.98■□□□□ 0.15
CPSF3-203ENST00000475482 TEKT4Q8WW24 435 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms