RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 HACD1B0YJ81 288 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 MYBPC2Q14324 1141 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 DNAJC1Q96KC8 554 aaKnown RBP11.11□□□□□ -0.63
VAPB-204ENST00000475243 APOL4Q9BPW4 351 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 MRPL9Q9BYD2 267 aaKnown RBP11.11□□□□□ -0.63
VAPB-204ENST00000475243 ZNF232Q9UNY5 417 aa11.11□□□□□ -0.63
VAPB-204ENST00000475243 NT5C1B-RDH14C9J2C7 533 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 KCNH1O95259 989 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 CTPS1P17812 591 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 NEK3P51956 506 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 LPIN1Q14693 890 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 ATP13A4Q4VNC1 1196 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 GPAT3Q53EU6 434 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 UNC5AQ6ZN44 842 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 LRRC74BQ6ZQY2 392 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 BHLHE22Q8NFJ8 381 aaPredicted RBP11.1□□□□□ -0.63
VAPB-204ENST00000475243 RORBQ92753 470 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 EXO5Q9H790 373 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 PACSIN3Q9UKS6 424 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 ABCA9Q8IUA7 1624 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 NRXN1Q9ULB1 1477 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 FRMPD4Q14CM0 1322 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 PTSQ03393 145 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 DGCR6Q14129 220 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 GPR156Q8NFN8 814 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 FAM45AQ8TCE6 357 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 MAGEC3Q8TD91 643 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 TLR10Q9BXR5 811 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 EPB41L4BQ9H329 900 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 UMODL1Q5DID0 1318 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 MYPNQ86TC9 1320 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 LRRC14BA6NHZ5 514 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 ACSL4O60488 711 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 CCNB1P14635 433 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 PTPRAP18433 802 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 ABRQ12979 859 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 PPIL2Q13356 520 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 TAF5Q15542 800 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 SLC45A4Q5BKX6 768 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 ST13P5Q8NFI4 369 aaPredicted RBP11.1□□□□□ -0.63
VAPB-204ENST00000475243 IL22Q9GZX6 179 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 DAPK2Q9UIK4 370 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.1□□□□□ -0.63
VAPB-204ENST00000475243 SESN1Q9Y6P5 492 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 UBA1P22314 1058 aaKnown RBP11.1□□□□□ -0.63
VAPB-204ENST00000475243 GPR1P46091 355 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 CACNA2D1P54289 1103 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 GALNT3Q14435 633 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 DACT2Q5SW24 774 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 BTN2A1Q7KYR7 527 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 PARGQ86W56 976 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 FLCNQ8NFG4 579 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.1□□□□□ -0.63
VAPB-204ENST00000475243 MYL12BO14950 172 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 SHBGP04278 402 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 ME2P23368 584 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 KRR1Q13601 381 aaKnown RBP11.1□□□□□ -0.63
VAPB-204ENST00000475243 CES5AQ6NT32 575 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 SH3BP5LQ7L8J4 393 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 DNAJB14Q8TBM8 379 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
VAPB-204ENST00000475243 ARHGAP28Q9P2N2 729 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 STARD13Q9Y3M8 1113 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 ZNF839A8K0R7 811 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 CYP1A1P04798 512 aaPredicted RBP11.1□□□□□ -0.63
VAPB-204ENST00000475243 TSPAN19P0C672 248 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 CTNNB1P35222 781 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 RALGDSQ12967 914 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 FRG1Q14331 258 aaKnown RBP11.1□□□□□ -0.63
VAPB-204ENST00000475243 RRP1BQ14684 758 aaKnown RBP11.1□□□□□ -0.63
VAPB-204ENST00000475243 PARP6Q2NL67 630 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 ZIK1Q3SY52 487 aaPredicted RBP11.1□□□□□ -0.63
VAPB-204ENST00000475243 NEPROQ6NW34 567 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 POLNQ7Z5Q5 900 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 WNT8BQ93098 351 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 SKA1Q96BD8 255 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 COQ6Q9Y2Z9 468 aa11.1□□□□□ -0.63
VAPB-204ENST00000475243 PEX11AO75192 247 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 EIF4BP23588 611 aaKnown RBP11.09□□□□□ -0.63
VAPB-204ENST00000475243 ADRA1DP25100 572 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 SNRPD1P62314 119 aaKnown RBP11.09□□□□□ -0.63
VAPB-204ENST00000475243 ACSM2AQ08AH3 577 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 ACSM2BQ68CK6 577 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 CLVS1Q8IUQ0 354 aaPredicted RBP11.09□□□□□ -0.63
VAPB-204ENST00000475243 EFCAB3Q8N7B9 438 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 LENG9Q96B70 501 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 PCDHA11Q9Y5I1 949 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 A0A0U1RQJ8 604 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 EFCAB10A6NFE3 127 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 CENPXA8MT69 81 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 APOC4-APOC2K7ER74 178 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 APOC2P02655 101 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 HIST1H2ABP04908 130 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 SMIM10L2AP0DMW4 78 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 SMIM10L2BP0DMW5 78 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 SLURP2P0DP57 97 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 DGKAP23743 735 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 MAMLD1Q13495 774 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 C16orf72Q14CZ0 275 aa11.09□□□□□ -0.63
VAPB-204ENST00000475243 HIST3H2AQ7L7L0 130 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms