RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 CCDC185Q8N715 623 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 OR2A12Q8NGT7 310 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 NAP1L5Q96NT1 182 aaPredicted RBP20.91■□□□□ 0.94
SNX13-206ENST00000474067 CDC6Q99741 560 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 ZNF212Q9UDV6 495 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 SERGEFQ9UGK8 458 aa20.91■□□□□ 0.94
SNX13-206ENST00000474067 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.91■□□□□ 0.94
SNX13-206ENST00000474067 TMCO5BA8MYB1 307 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 CBFA2T2O43439 604 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 LATO43561 262 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 GJB3O75712 270 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 CD38P28907 300 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 NUMBP49757 651 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 SNRPD1P62314 119 aaKnown RBP20.9■□□□□ 0.94
SNX13-206ENST00000474067 ZBED6P86452 979 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 MAMLD1Q13495 774 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 ZNF423Q2M1K9 1284 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 PARP15Q460N3 678 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 CARD16Q5EG05 197 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 NAPEPLDQ6IQ20 393 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 IQCHQ86VS3 1027 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 NLRP14Q86W24 1093 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 RTL3Q8N8U3 475 aaKnown RBP20.9■□□□□ 0.94
SNX13-206ENST00000474067 FAM174AQ8TBP5 190 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 ARHGEF2Q92974 986 aaKnown RBP20.9■□□□□ 0.94
SNX13-206ENST00000474067 ARHGEF26Q96DR7 871 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 SERAC1Q96JX3 654 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 HEPHQ9BQS7 1158 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 SYT11Q9BT88 431 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 OSBPL1AQ9BXW6 950 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 TTYH3Q9C0H2 523 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 DNAI1Q9UI46 699 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 FZD10Q9ULW2 581 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 LUC7L2Q9Y383 392 aaKnown RBP20.9■□□□□ 0.94
SNX13-206ENST00000474067 CACNA1EQ15878 2313 aa20.9■□□□□ 0.94
SNX13-206ENST00000474067 ADAMTS9Q9P2N4 1935 aa20.89■□□□□ 0.93
SNX13-206ENST00000474067 WASH4PA8MWX3 477 aa20.89■□□□□ 0.93
SNX13-206ENST00000474067 CREB3O43889 395 aa20.89■□□□□ 0.93
SNX13-206ENST00000474067 GJB6O95452 261 aa20.89■□□□□ 0.93
SNX13-206ENST00000474067 MT-CO1P00395 513 aa20.89■□□□□ 0.93
SNX13-206ENST00000474067 FTLP02792 175 aaPredicted RBP20.89■□□□□ 0.93
SNX13-206ENST00000474067 SERPING1P05155 500 aa20.89■□□□□ 0.93
SNX13-206ENST00000474067 CD59P13987 128 aa20.89■□□□□ 0.93
SNX13-206ENST00000474067 ARRB1P49407 418 aaPredicted RBP20.89■□□□□ 0.93
SNX13-206ENST00000474067 TPI1P60174 286 aa20.89■□□□□ 0.93
SNX13-206ENST00000474067 RPL7AP62424 266 aaKnown RBP20.89■□□□□ 0.93
SNX13-206ENST00000474067 SIM1P81133 766 aaPredicted RBP20.89■□□□□ 0.93
SNX13-206ENST00000474067 LINGO4Q6UY18 593 aa20.89■□□□□ 0.93
SNX13-206ENST00000474067 ZNF653Q96CK0 615 aa20.89■□□□□ 0.93
SNX13-206ENST00000474067 HDAC8Q9BY41 377 aa20.89■□□□□ 0.93
SNX13-206ENST00000474067 GDF3Q9NR23 364 aa20.89■□□□□ 0.93
SNX13-206ENST00000474067 CNOT8Q9UFF9 292 aaKnown RBP20.89■□□□□ 0.93
SNX13-206ENST00000474067 APOBEC2Q9Y235 224 aaKnown RBP20.89■□□□□ 0.93
SNX13-206ENST00000474067 PRAMEF26H0Y7S4 382 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 PRPSAP2O60256 369 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 ZMPSTE24O75844 475 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 TPM1P09493 284 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 DNA2P51530 1060 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 NEK3P51956 506 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 CNTN1Q12860 1018 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 TRIM14Q14142 442 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 STAT4Q14765 748 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 KIF19Q2TAC6 998 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 ZSCAN23Q3MJ62 389 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 INO80DQ53TQ3 878 aaPredicted RBP20.88■□□□□ 0.93
SNX13-206ENST00000474067 AGBL4Q5VU57 503 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 ERN2Q76MJ5 926 aaKnown RBP20.88■□□□□ 0.93
SNX13-206ENST00000474067 ZNF571Q7Z3V5 609 aaPredicted RBP20.88■□□□□ 0.93
SNX13-206ENST00000474067 MFSD2AQ8NA29 543 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 SETD7Q8WTS6 366 aaKnown RBP20.88■□□□□ 0.93
SNX13-206ENST00000474067 RAB7BQ96AH8 199 aa20.88■□□□□ 0.93
SNX13-206ENST00000474067 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.88■□□□□ 0.93
SNX13-206ENST00000474067 DAPK3O43293 454 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 KDELR3O43731 214 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 PCDHGA12O60330 932 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 GSRP00390 522 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 ITGB7P26010 798 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 GRK6P43250 576 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 ARF5P84085 180 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 GRM3Q14832 879 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 TRIP6Q15654 476 aaKnown RBP20.87■□□□□ 0.93
SNX13-206ENST00000474067 ERMARDQ5T6L9 678 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 FBXL19Q6PCT2 694 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 DPY19L3Q6ZPD9 716 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 RYBPQ8N488 228 aaPredicted RBP20.87■□□□□ 0.93
SNX13-206ENST00000474067 OR2AP1Q8NGE2 309 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 TNKS2Q9H2K2 1166 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 LCMT1Q9UIC8 334 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 SARDHQ9UL12 918 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 CAPN11Q9UMQ6 739 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 AP4E1Q9UPM8 1137 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 SNX11Q9Y5W9 270 aa20.87■□□□□ 0.93
SNX13-206ENST00000474067 TMEM191CA6NGB0 347 aa20.86■□□□□ 0.93
SNX13-206ENST00000474067 K7ERQ8 282 aa20.86■□□□□ 0.93
SNX13-206ENST00000474067 GIPC1O14908 333 aa20.86■□□□□ 0.93
SNX13-206ENST00000474067 SMAD6O43541 496 aaKnown RBP20.86■□□□□ 0.93
SNX13-206ENST00000474067 BUB1O43683 1085 aa20.86■□□□□ 0.93
SNX13-206ENST00000474067 SH3BP5O60239 455 aa20.86■□□□□ 0.93
SNX13-206ENST00000474067 POP4O95707 220 aaKnown RBP20.86■□□□□ 0.93
SNX13-206ENST00000474067 CTSKP43235 329 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms