RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 STRNO43815 780 aa2.56□□□□□ -2
CALD1-216ENST00000473714 PPP6R2O75170 966 aa2.56□□□□□ -2
CALD1-216ENST00000473714 TIPRLO75663 272 aa2.56□□□□□ -2
CALD1-216ENST00000473714 RNASEH2AO75792 299 aaKnown RBP2.56□□□□□ -2
CALD1-216ENST00000473714 HLA-DOAP06340 250 aa2.56□□□□□ -2
CALD1-216ENST00000473714 CKMT1AP12532 417 aa2.56□□□□□ -2
CALD1-216ENST00000473714 AKR1A1P14550 325 aa2.56□□□□□ -2
CALD1-216ENST00000473714 IL1R1P14778 569 aa2.56□□□□□ -2
CALD1-216ENST00000473714 CPA1P15085 419 aa2.56□□□□□ -2
CALD1-216ENST00000473714 EGR1P18146 543 aa2.56□□□□□ -2
CALD1-216ENST00000473714 HK1P19367 917 aa2.56□□□□□ -2
CALD1-216ENST00000473714 ADD2P35612 726 aa2.56□□□□□ -2
CALD1-216ENST00000473714 PAFAH1B1P43034 410 aa2.56□□□□□ -2
CALD1-216ENST00000473714 NOVA1P51513 510 aaKnown RBP2.56□□□□□ -2
CALD1-216ENST00000473714 HMGCS2P54868 508 aa2.56□□□□□ -2
CALD1-216ENST00000473714 ACTR2P61160 394 aa2.56□□□□□ -2
CALD1-216ENST00000473714 WDR5P61964 334 aaKnown RBP2.56□□□□□ -2
CALD1-216ENST00000473714 CCNA1P78396 465 aa2.56□□□□□ -2
CALD1-216ENST00000473714 IRX3P78415 501 aaPredicted RBP2.56□□□□□ -2
CALD1-216ENST00000473714 DEFB103AP81534 67 aa2.56□□□□□ -2
CALD1-216ENST00000473714 SLC25A3Q00325 362 aa2.56□□□□□ -2
CALD1-216ENST00000473714 RNASELQ05823 741 aaKnown RBP2.56□□□□□ -2
CALD1-216ENST00000473714 SCAPQ12770 1279 aa2.56□□□□□ -2
CALD1-216ENST00000473714 CUL4BQ13620 913 aa2.56□□□□□ -2
CALD1-216ENST00000473714 E2F2Q14209 437 aa2.56□□□□□ -2
CALD1-216ENST00000473714 ANKRD1Q15327 319 aa2.56□□□□□ -2
CALD1-216ENST00000473714 ELAVL1Q15717 326 aaKnown RBP2.56□□□□□ -2
CALD1-216ENST00000473714 TMTC4Q5T4D3 741 aa2.56□□□□□ -2
CALD1-216ENST00000473714 LCE1AQ5T7P2 110 aa2.56□□□□□ -2
CALD1-216ENST00000473714 STPG1Q5TH74 334 aa2.56□□□□□ -2
CALD1-216ENST00000473714 RAP1GAP2Q684P5 730 aa2.56□□□□□ -2
CALD1-216ENST00000473714 TAPT1Q6NXT6 567 aa2.56□□□□□ -2
CALD1-216ENST00000473714 TMEM108Q6UXF1 575 aa2.56□□□□□ -2
CALD1-216ENST00000473714 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.56□□□□□ -2
CALD1-216ENST00000473714 SYNE3Q6ZMZ3 975 aa2.56□□□□□ -2
CALD1-216ENST00000473714 COPS6Q7L5N1 327 aa2.56□□□□□ -2
CALD1-216ENST00000473714 KCTD20Q7Z5Y7 419 aa2.56□□□□□ -2
CALD1-216ENST00000473714 VRK3Q8IV63 474 aa2.56□□□□□ -2
CALD1-216ENST00000473714 SLC15A3Q8IY34 581 aa2.56□□□□□ -2
CALD1-216ENST00000473714 ELOA2Q8IYF1 753 aaPredicted RBP2.56□□□□□ -2
CALD1-216ENST00000473714 CFAP52Q8N1V2 620 aa2.56□□□□□ -2
CALD1-216ENST00000473714 ANKRD44Q8N8A2 993 aa2.56□□□□□ -2
CALD1-216ENST00000473714 PCYOX1LQ8NBM8 494 aa2.56□□□□□ -2
CALD1-216ENST00000473714 PSD4Q8NDX1 1056 aa2.56□□□□□ -2
CALD1-216ENST00000473714 OR10H5Q8NGA6 315 aa2.56□□□□□ -2
CALD1-216ENST00000473714 OTUD7AQ8TE49 926 aaPredicted RBP2.56□□□□□ -2
CALD1-216ENST00000473714 NOC3LQ8WTT2 800 aaKnown RBP2.56□□□□□ -2
CALD1-216ENST00000473714 HMGB4Q8WW32 186 aa2.56□□□□□ -2
CALD1-216ENST00000473714 ASB12Q8WXK4 309 aa2.56□□□□□ -2
CALD1-216ENST00000473714 ST8SIA2Q92186 375 aa2.56□□□□□ -2
CALD1-216ENST00000473714 STAMQ92783 540 aa2.56□□□□□ -2
CALD1-216ENST00000473714 MARS2Q96GW9 593 aaKnown RBP2.56□□□□□ -2
CALD1-216ENST00000473714 KLHL32Q96NJ5 620 aa2.56□□□□□ -2
CALD1-216ENST00000473714 HIST1H2AAQ96QV6 131 aa2.56□□□□□ -2
CALD1-216ENST00000473714 PNKPQ96T60 521 aa2.56□□□□□ -2
CALD1-216ENST00000473714 SDF4Q9BRK5 362 aa2.56□□□□□ -2
CALD1-216ENST00000473714 KRTAP1-5Q9BYS1 174 aa2.56□□□□□ -2
CALD1-216ENST00000473714 RNPEPQ9H4A4 650 aa2.56□□□□□ -2
CALD1-216ENST00000473714 ZNF768Q9H5H4 540 aaKnown RBP2.56□□□□□ -2
CALD1-216ENST00000473714 JMJD4Q9H9V9 463 aa2.56□□□□□ -2
CALD1-216ENST00000473714 MLXIPQ9HAP2 919 aa2.56□□□□□ -2
CALD1-216ENST00000473714 UBN1Q9NPG3 1134 aa2.56□□□□□ -2
CALD1-216ENST00000473714 OLA1Q9NTK5 396 aaKnown RBP2.56□□□□□ -2
CALD1-216ENST00000473714 TMOD2Q9NZR1 351 aa2.56□□□□□ -2
CALD1-216ENST00000473714 DNAJB11Q9UBS4 358 aa2.56□□□□□ -2
CALD1-216ENST00000473714 WNT16Q9UBV4 365 aa2.56□□□□□ -2
CALD1-216ENST00000473714 AASSQ9UDR5 926 aa2.56□□□□□ -2
CALD1-216ENST00000473714 IL17BQ9UHF5 180 aa2.56□□□□□ -2
CALD1-216ENST00000473714 EIF2B4Q9UI10 523 aaKnown RBP2.56□□□□□ -2
CALD1-216ENST00000473714 RAB23Q9ULC3 237 aa2.56□□□□□ -2
CALD1-216ENST00000473714 CA14Q9ULX7 337 aa2.56□□□□□ -2
CALD1-216ENST00000473714 SUFUQ9UMX1 484 aa2.56□□□□□ -2
CALD1-216ENST00000473714 AGAP1Q9UPQ3 857 aa2.56□□□□□ -2
CALD1-216ENST00000473714 INSL6Q9Y581 213 aa2.56□□□□□ -2
CALD1-216ENST00000473714 SYNRGQ9UMZ2 1314 aa2.56□□□□□ -2
CALD1-216ENST00000473714 TSC2P49815 1807 aa2.56□□□□□ -2
CALD1-216ENST00000473714 MYH13Q9UKX3 1938 aa2.56□□□□□ -2
CALD1-216ENST00000473714 URB1O60287 2271 aaKnown RBP2.56□□□□□ -2
CALD1-216ENST00000473714 ACACAQ13085 2346 aa2.56□□□□□ -2
CALD1-216ENST00000473714 A0A087WV48 116 aa2.55□□□□□ -2
CALD1-216ENST00000473714 CCDC195A0A1B0GUA6 201 aa2.55□□□□□ -2
CALD1-216ENST00000473714 ANKRD18BA2A2Z9 1011 aa2.55□□□□□ -2
CALD1-216ENST00000473714 DRGXA6NNA5 263 aa2.55□□□□□ -2
CALD1-216ENST00000473714 C2CD4DB7Z1M9 353 aa2.55□□□□□ -2
CALD1-216ENST00000473714 C5orf67F2Z3F1 127 aa2.55□□□□□ -2
CALD1-216ENST00000473714 H0Y3Z8 333 aa2.55□□□□□ -2
CALD1-216ENST00000473714 hCG_1984214I3L0E3 225 aa2.55□□□□□ -2
CALD1-216ENST00000473714 J3KTA2 159 aa2.55□□□□□ -2
CALD1-216ENST00000473714 EYA2O00167 538 aa2.55□□□□□ -2
CALD1-216ENST00000473714 PSMD9O00233 223 aa2.55□□□□□ -2
CALD1-216ENST00000473714 ANP32CO43423 234 aa2.55□□□□□ -2
CALD1-216ENST00000473714 TRIAP1O43715 76 aa2.55□□□□□ -2
CALD1-216ENST00000473714 RRP9O43818 475 aaKnown RBP2.55□□□□□ -2
CALD1-216ENST00000473714 ZNF500O60304 480 aaPredicted RBP2.55□□□□□ -2
CALD1-216ENST00000473714 ZBED4O75132 1171 aa2.55□□□□□ -2
CALD1-216ENST00000473714 CNMDO75829 334 aa2.55□□□□□ -2
CALD1-216ENST00000473714 STC2O76061 302 aa2.55□□□□□ -2
CALD1-216ENST00000473714 GPANK1O95872 356 aa2.55□□□□□ -2
CALD1-216ENST00000473714 RB1P06400 928 aa2.55□□□□□ -2
CALD1-216ENST00000473714 DCNP07585 359 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms