RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 RARS2Q5T160 578 aaKnown RBP21.46■■□□□ 1.03
COL18A1-207ENST00000473212 ARMC3Q5W041 872 aa21.46■■□□□ 1.03
COL18A1-207ENST00000473212 NXNQ6DKJ4 435 aa21.46■■□□□ 1.03
COL18A1-207ENST00000473212 OTOP3Q7RTS5 596 aa21.46■■□□□ 1.03
COL18A1-207ENST00000473212 PRICKLE1Q96MT3 831 aaPredicted RBP21.46■■□□□ 1.03
COL18A1-207ENST00000473212 DRC3Q9H069 523 aa21.46■■□□□ 1.03
COL18A1-207ENST00000473212 CASS4Q9NQ75 786 aa21.46■■□□□ 1.03
COL18A1-207ENST00000473212 GDAP2Q9NXN4 497 aa21.46■■□□□ 1.03
COL18A1-207ENST00000473212 ZDHHC2Q9UIJ5 367 aa21.46■■□□□ 1.03
COL18A1-207ENST00000473212 GRID2O43424 1007 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 TIMM44O43615 452 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 USP17L7P0C7H9 530 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 CYP2C9P11712 490 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 ARSAP15289 507 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 PTPN1P18031 435 aaKnown RBP21.45■■□□□ 1.02
COL18A1-207ENST00000473212 TFEBP19484 476 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 CEACAM7Q14002 265 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 ADGRE1Q14246 886 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 PDCD2Q16342 344 aaPredicted RBP21.45■■□□□ 1.02
COL18A1-207ENST00000473212 PNPLA1Q8N8W4 532 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 GPRC5AQ8NFJ5 357 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 CNBD2Q96M20 576 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 HNRNPABQ99729 332 aaKnown RBP21.45■■□□□ 1.02
COL18A1-207ENST00000473212 SGIP1Q9BQI5 828 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 PRDM16Q9HAZ2 1276 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 LZTS1Q9Y250 596 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 STX16-NPEPL1H3BU86 382 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 TFAP2AP05549 437 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 SMIM10L2AP0DMW4 78 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 SMIM10L2BP0DMW5 78 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 NAGLUP54802 743 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 TPI1P60174 286 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 UBXN11Q5T124 520 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 LIPMQ5VYY2 423 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 KCTD11Q693B1 232 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 LILRA2Q8N149 483 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 BHLHE22Q8NFJ8 381 aaPredicted RBP21.45■■□□□ 1.02
COL18A1-207ENST00000473212 EMID1Q96A84 441 aaPredicted RBP21.45■■□□□ 1.02
COL18A1-207ENST00000473212 MPP4Q96JB8 637 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 APBA2Q99767 749 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 Q9H521 79 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 CRTAC1Q9NQ79 661 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 RIMS3Q9UJD0 308 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 AP4B1Q9Y6B7 739 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 TSC2P49815 1807 aa21.45■■□□□ 1.02
COL18A1-207ENST00000473212 RBM47A0AV96 593 aaKnown RBP21.44■■□□□ 1.02
COL18A1-207ENST00000473212 CLPTM1O96005 669 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 CYP2B6P20813 491 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 PPARGP37231 505 aaPredicted RBP21.44■■□□□ 1.02
COL18A1-207ENST00000473212 DPP6P42658 865 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 ZYG11AQ6WRX3 759 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 RBM44Q6ZP01 1051 aaKnown RBP21.44■■□□□ 1.02
COL18A1-207ENST00000473212 ARHGAP36Q6ZRI8 547 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 TMEM151AQ8N4L1 468 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 RNF217Q8TC41 542 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 DGCR14Q96DF8 476 aaKnown RBP21.44■■□□□ 1.02
COL18A1-207ENST00000473212 ZNF419Q96HQ0 510 aaPredicted RBP21.44■■□□□ 1.02
COL18A1-207ENST00000473212 SCYL1Q96KG9 808 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 EPB41L1Q9H4G0 881 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 NDUFA13Q9P0J0 144 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 APPL1Q9UKG1 709 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 PDCD11Q14690 1871 aaKnown RBP21.44■■□□□ 1.02
COL18A1-207ENST00000473212 DYNC1LI2O43237 492 aaPredicted RBP21.44■■□□□ 1.02
COL18A1-207ENST00000473212 NCAM1P13591 858 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 RPL5P46777 297 aaKnown RBP21.44■■□□□ 1.02
COL18A1-207ENST00000473212 FASTKD5Q7L8L6 764 aaKnown RBP21.44■■□□□ 1.02
COL18A1-207ENST00000473212 SPATA22Q8NHS9 363 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 B4GALNT2Q8NHY0 566 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 EZH1Q92800 747 aaPredicted RBP21.44■■□□□ 1.02
COL18A1-207ENST00000473212 SLC2A13Q96QE2 648 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 DDIT4Q9NX09 232 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 TLK1Q9UKI8 766 aa21.44■■□□□ 1.02
COL18A1-207ENST00000473212 PLXNB2O15031 1838 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 JCHAINP01591 159 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 GABRB3P28472 473 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 CSE1LP55060 971 aaKnown RBP21.43■■□□□ 1.02
COL18A1-207ENST00000473212 DGKDQ16760 1214 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 METTL25Q8N6Q8 603 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 KCTD4Q8WVF5 259 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 TNIP3Q96KP6 325 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 ZNF560Q96MR9 790 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 C1QTNF1Q9BXJ1 281 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 WDR41Q9HAD4 459 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 RAB26Q9ULW5 256 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 STAP1Q9ULZ2 295 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 NRCAMQ92823 1304 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 MYOCOSA0A1B0GUC4 107 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 TMEM233B4DJY2 109 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 VILLO15195 856 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 TREHO43280 583 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 CD4P01730 458 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 SRGAP2BP0DMP2 458 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 ATP6V1B1P15313 513 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 SEMA3BQ13214 749 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 SNX17Q15036 470 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 DUSP28Q4G0W2 176 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 DPP9Q86TI2 863 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 GALNT4Q8N4A0 578 aa21.43■■□□□ 1.02
COL18A1-207ENST00000473212 CPSF7Q8N684 471 aaKnown RBP21.43■■□□□ 1.02
COL18A1-207ENST00000473212 SMG8Q8ND04 991 aaKnown RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms