RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, human

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS45-206	ENST00000472756	GJB1	P08034	283 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	RAP2A	P10114	183 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	H2AFX	P16104	143 aa	Predicted RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	TRIM21	P19474	475 aa	Known RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	MT3	P25713	68 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	CTSS	P25774	331 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	CNGA1	P29973	690 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	CASQ1	P31415	396 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	PSMC2	P35998	433 aa	Known RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	TCF7	P36402	384 aa	Predicted RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	TNFSF9	P41273	254 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	MAGEA1	P43355	309 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	GCLM	P48507	274 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	VAMP7	P51809	220 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	MANF	P55145	182 aa	Known RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	LGALS4	P56470	323 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	NLRP11	P59045	1033 aa	Known RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	IRX3	P78415	501 aa	Predicted RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	ARHGAP1	Q07960	439 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	BFSP1	Q12934	665 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	SNAPC2	Q13487	334 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	PRPF4B	Q13523	1007 aa	Known RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	CAPS	Q13938	189 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	KRT81	Q14533	505 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	DRAP1	Q14919	205 aa	Predicted RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	EMC2	Q15006	297 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	ELF2	Q15723	593 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	CCL15	Q16663	113 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	EXOC3L4	Q17RC7	722 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	SLC44A4	Q53GD3	710 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	PRAMEF19	Q5SWL8	479 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	CELF3	Q5SZQ8	465 aa	Known RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	FAM102B	Q5T8I3	360 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	LMBRD2	Q68DH5	695 aa	Predicted RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	MIS18BP1	Q6P0N0	1132 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	FBXO38	Q6PIJ6	1188 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	FAM180A	Q6UWF9	173 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	GBP6	Q6ZN66	633 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	ARMCX2	Q7L311	632 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	FASTKD5	Q7L8L6	764 aa	Known RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	ARMC9	Q7Z3E5	817 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	ANKRD23	Q86SG2	305 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	RNF180	Q86T96	592 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	RASAL3	Q86YV0	1011 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	SMAP1	Q8IYB5	467 aa	Predicted RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	COLGALT2	Q8IYK4	626 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	FAM186B	Q8IYM0	893 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	CCDC170	Q8IYT3	715 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	ANKRD13C	Q8N6S4	541 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	UBR7	Q8N806	425 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	NOA1	Q8NC60	698 aa	Known RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	ANKRD20A12P	Q8NF67	263 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	NEK11	Q8NG66	645 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	KIF18A	Q8NI77	898 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	TAS1R2	Q8TE23	839 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	AFAP1L1	Q8TED9	768 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	PARD3B	Q8TEW8	1205 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	COG1	Q8WTW3	980 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	SLC20A1	Q8WUM9	679 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	CASKIN2	Q8WXE0	1202 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	PSPC1	Q8WXF1	523 aa	Known RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	SEPT1	Q8WYJ6	367 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	USP6NL	Q92738	828 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	SYN2	Q92777	582 aa	Predicted RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	JAKMIP2	Q96AA8	810 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	ARHGEF26	Q96DR7	871 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	SAAL1	Q96ER3	474 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	ERO1A	Q96HE7	468 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	ZNF668	Q96K58	619 aa	Predicted RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	CEP170P1	Q96L14	293 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	MARK4	Q96L34	752 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	ACCS	Q96QU6	501 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	PNKP	Q96T60	521 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	MMS19	Q96T76	1030 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	UHRF1	Q96T88	793 aa	Predicted RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	C16orf70	Q9BSU1	422 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	TLR10	Q9BXR5	811 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	STK33	Q9BYT3	514 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	INTS2	Q9H0H0	1204 aa	Known RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	GOLPH3	Q9H4A6	298 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	EBF3	Q9H4W6	596 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	HAUS4	Q9H6D7	363 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	MINDY3	Q9H8M7	445 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	ANKZF1	Q9H8Y5	726 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	APOBEC3G	Q9HC16	384 aa	Known RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	METTL14	Q9HCE5	456 aa	Known RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	GBA2	Q9HCG7	927 aa	Predicted RBP	2.57	□□□□□ -2
VPS45-206	ENST00000472756	PTPRH	Q9HD43	1115 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	ANLN	Q9NQW6	1124 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	ZNF302	Q9NR11	478 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	EHD2	Q9NZN4	543 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	FBXO40	Q9UH90	709 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	CDC23	Q9UJX2	597 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	FBXL5	Q9UKA1	691 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	GJD2	Q9UKL4	321 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	GUCA1B	Q9UMX6	200 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	STXBP5L	Q9Y2K9	1186 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	COQ4	Q9Y3A0	265 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	PRKAB1	Q9Y478	270 aa		2.57	□□□□□ -2
VPS45-206	ENST00000472756	WNT6	Q9Y6F9	365 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms