RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 FGFBP1Q14512 234 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 RSPO4Q2I0M5 234 aaPredicted RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 NKAPLQ5M9Q1 402 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 UBXN11Q5T124 520 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 INTS5Q6P9B9 1019 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 USP17L6PQ6QN14 398 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 PPP1R21Q6ZMI0 780 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 SCN4BQ8IWT1 228 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 TUSC5Q8IXB3 177 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 ADGRF2Q8IZF7 708 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 CCAR2Q8N163 923 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 ANKRD13CQ8N6S4 541 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 KYQ8NBH2 561 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 AGBL5Q8NDL9 886 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 POC1BQ8TC44 478 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 RNASE8Q8TDE3 154 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 FNIP1Q8TF40 1166 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 PTERQ96BW5 349 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 SDCCAG3Q96C92 435 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 PPP1R13BQ96KQ4 1090 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 SPATA17Q96L03 361 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 MACROD1Q9BQ69 325 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 PAG1Q9NWQ8 432 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 MCM9Q9NXL9 1143 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 CGNQ9P2M7 1197 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 UPB1Q9UBR1 384 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 CPSF3Q9UKF6 684 aaKnown RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 BLMP54132 1417 aaPredicted RBP2.8□□□□□ -1.96
XRN1-210ENST00000472697 RALGAPBQ86X10 1494 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 SAMD9LQ8IVG5 1584 aa2.8□□□□□ -1.96
XRN1-210ENST00000472697 LRP6O75581 1613 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 PTPN23Q9H3S7 1636 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 PRDM15P57071 1507 aaPredicted RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 GPATCH8Q9UKJ3 1502 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 BCL9LQ86UU0 1499 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 KIAA1107Q9UPP5 1409 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 COL15A1P39059 1388 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 TNRQ92752 1358 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 NINLQ9Y2I6 1382 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 A0A1W2PRX2 142 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 F5H697 171 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 HTATSF1O43719 755 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 B4GALT4O60513 344 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 PAGE4O60829 102 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 TULP3O75386 442 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 PRDM1O75626 825 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 WDR47O94967 919 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 REC8O95072 547 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 GCNT3O95395 438 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 JUNP05412 331 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 LBPP18428 481 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 TRIM21P19474 475 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 PSMA3P25788 255 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 GRK5P34947 590 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 CAPZA2P47755 286 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 PDE1AP54750 535 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 NPEPPSP55786 919 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 HNRNPKP61978 463 aaKnown RBP eCLIP2.79□□□□□ -1.96
XRN1-210ENST00000472697 GRSF1Q12849 480 aaKnown RBP eCLIP2.79□□□□□ -1.96
XRN1-210ENST00000472697 SEMA3BQ13214 749 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 SNTB1Q13884 538 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 CCNIQ14094 377 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 GLE1Q53GS7 698 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 RABL3Q5HYI8 236 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 FAM102AQ5T9C2 384 aaPredicted RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 TMEM81Q6P7N7 255 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 SLC23A3Q6PIS1 610 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 KYAT3Q6YP21 454 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 SLC46A3Q7Z3Q1 461 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 ARHGAP12Q8IWW6 846 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 IZUMO1Q8IYV9 350 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 ADGRG5Q8IZF4 528 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 SYCP3Q8IZU3 236 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 FITM2Q8N6M3 262 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 SETD9Q8NE22 299 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 OR56A1Q8NGH5 318 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 FIBINQ8TAL6 211 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 ST7LQ8TDW4 575 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 DEPDC1BQ8WUY9 529 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 RSC1A1Q92681 617 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 CENPTQ96BT3 561 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 CTHRC1Q96CG8 243 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 LRRC37BQ96QE4 947 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 NACC1Q96RE7 527 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 CPPED1Q9BRF8 314 aaPredicted RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 FSD1Q9BTV5 496 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 VN1R3Q9BXE9 311 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 C1QTNF5Q9BXJ0 243 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 TRIM7Q9C029 511 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 FAM83DQ9H4H8 585 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 FBRSL1Q9HCM7 1045 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 PDRG1Q9NUG6 133 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 MBD1Q9UIS9 605 aaPredicted RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 CHD2O14647 1828 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 CROCC2H7BZ55 1655 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 EIF2AK4Q9P2K8 1649 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 CCDC18Q5T9S5 1454 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 RTEL1-TNFRSF6BF6WH68 1400 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 TROQ12816 1431 aaPredicted RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms