RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 KBTBD4Q9NVX7 518 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 ARGLU1Q9NWB6 273 aaPredicted RBP9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 HESX1Q9UBX0 185 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 IPO11Q9UI26 975 aaKnown RBP9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 SLCO3A1Q9UIG8 710 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 INTS6Q9UL03 887 aaKnown RBP9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 CTNND2Q9UQB3 1225 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 FRMD4BQ9Y2L6 1034 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 PCDHB11Q9Y5F2 797 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 HS3ST3A1Q9Y663 406 aa9.16□□□□□ -0.94
SYNGAP1-205ENST00000470232 A0A087X0B3 334 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 A0A1W2PNU3 283 aaPredicted RBP9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 XPO1O14980 1071 aaKnown RBP9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 ALOX15BO15296 676 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 LIPCP11150 499 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 HNRNPA2B1P22626 353 aaKnown RBP9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 SLC5A2P31639 672 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 CTSOP43234 321 aaPredicted RBP9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 ADKP55263 362 aaKnown RBP9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 OXCT1P55809 520 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 TBX4P57082 545 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 GNG11P61952 73 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 DPYDQ12882 1025 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 CUL4BQ13620 913 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 SPIDRQ14159 915 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 TBR1Q16650 682 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 ERCC6LQ2NKX8 1250 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 UNC13DQ70J99 1090 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 SLC9A9Q8IVB4 645 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 TC2NQ8N9U0 490 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 IQUBQ8NA54 791 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 TMEM145Q8NBT3 493 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 LRRN4CLQ8ND94 238 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 SPATA20Q8TB22 786 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 BTN2A2Q8WVV5 523 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 NAT6Q93015 286 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 RNF34Q969K3 372 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 LIN37Q96GY3 246 aaPredicted RBP9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 IL12RB2Q99665 862 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 C7orf25Q9BPX7 421 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 CARD6Q9BX69 1037 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 NIF3L1Q9GZT8 377 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 DYRK4Q9NR20 520 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 CA5BQ9Y2D0 317 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 MAN2B2Q9Y2E5 1009 aa9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 SPTAN1Q13813 2472 aaKnown RBP9.15□□□□□ -0.94
SYNGAP1-205ENST00000470232 LRRK2Q5S007 2527 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 TLN1Q9Y490 2541 aaKnown RBP9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 LY6G6EA0A0G2JKS1 128 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 A6NNZ2 444 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 TPP1O14773 563 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 PLD2O14939 933 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 NVLO15381 856 aaKnown RBP9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 AQP9O43315 295 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 MSI1O43347 362 aaKnown RBP9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 NEBLO76041 1014 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 LUC7L3O95232 432 aaKnown RBP9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 CSF2P04141 144 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 H2AFXP16104 143 aaPredicted RBP9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 CASP1P29466 404 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 SLC6A4P31645 630 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 DLG4P78352 724 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 CNTN1Q12860 1018 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 NR1I3Q14994 352 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 ACCSLQ4AC99 568 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 FAM133BQ5BKY9 247 aaKnown RBP9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 AGBL4Q5VU57 503 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 ARHGAP17Q68EM7 881 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 GUSBP11Q6P575 273 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 Q6ZSR6 202 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 RAB11FIP2Q7L804 512 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 HORMAD1Q86X24 394 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 ANKRD20A12PQ8NF67 263 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 OR13H1Q8NG92 308 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 ZNF564Q8TBZ8 553 aaPredicted RBP9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 TMEM174Q8WUU8 243 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 KCTD13Q8WZ19 329 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 UBXN4Q92575 508 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 NDRG1Q92597 394 aaKnown RBP9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 GSDMAQ96QA5 445 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 PANX2Q96RD6 677 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 MYOCQ99972 504 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 NAA15Q9BXJ9 866 aaKnown RBP9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 MAGEF1Q9HAY2 307 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 SLC39A2Q9NP94 309 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 CNGB3Q9NQW8 809 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 DMAC2Q9NW81 257 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 SLC25A13Q9UJS0 675 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 PRDM4Q9UKN5 801 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 ACSL6Q9UKU0 697 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 U3KQA8 63 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 NOTCH2Q04721 2471 aa9.14□□□□□ -0.95
SYNGAP1-205ENST00000470232 CREBBPQ92793 2442 aa9.13□□□□□ -0.95
SYNGAP1-205ENST00000470232 DOCK9Q9BZ29 2069 aa9.13□□□□□ -0.95
SYNGAP1-205ENST00000470232 PVALEFA0A1B0GWK0 134 aa9.13□□□□□ -0.95
SYNGAP1-205ENST00000470232 A0A1W2PQU0 124 aa9.13□□□□□ -0.95
SYNGAP1-205ENST00000470232 YJEFN3A6XGL0 299 aa9.13□□□□□ -0.95
SYNGAP1-205ENST00000470232 PPP1R3GB7ZBB8 358 aa9.13□□□□□ -0.95
SYNGAP1-205ENST00000470232 E7ENQ6 273 aa9.13□□□□□ -0.95
SYNGAP1-205ENST00000470232 MCF2LO15068 1137 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms