RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 HLA-DQB2P05538 268 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 ATP6V1C1P21283 382 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 CCNCP24863 283 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 VHLP40337 213 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 CDK7P50613 346 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 GRIK3Q13003 919 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 DNAL1Q4LDG9 190 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 NOMO2Q5JPE7 1267 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 MANEALQ5VSG8 457 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 LRRC74BQ6ZQY2 392 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 SPATA6LQ8N4H0 392 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 PPP1R36Q96LQ0 422 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 IL12RB2Q99665 862 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 CDH19Q9H159 772 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 C1orf21Q9H246 121 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 TASP1Q9H6P5 420 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 GLOD4Q9HC38 313 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 TRMT13Q9NUP7 481 aaKnown RBP14.91□□□□□ -0.02
CBWD3-205ENST00000469687 LOC100653049A0A140TA62 436 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 ADAMTS4O75173 837 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 PMPCBO75439 489 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 ZNF189O75820 626 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-205ENST00000469687 KRT34O76011 436 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 VAPBO95292 243 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 SLC35E2BP0CK96 405 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 CHRNA4P43681 627 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 COG7P83436 770 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 USP10Q14694 798 aaKnown RBP14.91□□□□□ -0.02
CBWD3-205ENST00000469687 KCNA10Q16322 511 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 ANO4Q32M45 955 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 ANO7Q6IWH7 933 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 PKN3Q6P5Z2 889 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 NET1Q7Z628 596 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-205ENST00000469687 KLHDC8BQ8IXV7 354 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 KCTD4Q8WVF5 259 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 SCG3Q8WXD2 468 aaKnown RBP14.91□□□□□ -0.02
CBWD3-205ENST00000469687 MIEF2Q96C03 454 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 ANKRD27Q96NW4 1050 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 HAPLN3Q96S86 360 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 ACE2Q9BYF1 805 aaPredicted RBP14.91□□□□□ -0.02
CBWD3-205ENST00000469687 OXSMQ9NWU1 459 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 SORCS3Q9UPU3 1222 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 DOCK4Q8N1I0 1966 aa14.91□□□□□ -0.02
CBWD3-205ENST00000469687 A0A1W2PQH9 124 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 DCXO43602 365 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 TRIM13O60858 407 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 UPP2O95045 317 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 KLHL2O95198 593 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 PDHA1P08559 390 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 MPSTP25325 297 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 HOXC13P31276 330 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 CCR1P32246 355 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 GPR15P49685 360 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 TUBP50607 506 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 TSPY1Q01534 308 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 CACNB2Q08289 660 aaPredicted RBP14.9□□□□□ -0.02
CBWD3-205ENST00000469687 LINC00523Q86TU6 105 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 SPATA2LQ8IUW3 424 aaPredicted RBP14.9□□□□□ -0.02
CBWD3-205ENST00000469687 CEP97Q8IW35 865 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 SCN4BQ8IWT1 228 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 KBTBD2Q8IY47 623 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 CENPLQ8N0S6 344 aaPredicted RBP14.9□□□□□ -0.02
CBWD3-205ENST00000469687 SCML4Q8N228 414 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 EFCAB3Q8N7B9 438 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 PNPLA1Q8N8W4 532 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 CFAP61Q8NHU2 1237 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 OR52B2Q96RD2 323 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 FCRL5Q96RD9 977 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 UPF3AQ9H1J1 476 aaKnown RBP14.9□□□□□ -0.02
CBWD3-205ENST00000469687 SMOC2Q9H3U7 446 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 RHOJQ9H4E5 214 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 CYP4F11Q9HBI6 524 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 ABCC13Q9NSE7 274 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 AAR2Q9Y312 384 aaKnown RBP14.9□□□□□ -0.02
CBWD3-205ENST00000469687 HS3ST4Q9Y661 456 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 GOLGA8QA0A0J9YX86 632 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 GOLGA8OA6NCC3 632 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 GOLGA8NF8WBI6 632 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 GCKP35557 465 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 COPAP53621 1224 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 ACTR3P61158 418 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 PCID2Q5JVF3 399 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 C1orf146Q5VVC0 180 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 EPGNQ6UW88 154 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 ZNF280BQ86YH2 543 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 TDRD5Q8NAT2 981 aaKnown RBP14.9□□□□□ -0.02
CBWD3-205ENST00000469687 SUSD3Q96L08 255 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 ZIC5Q96T25 663 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 ZFYVE28Q9HCC9 887 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 RBM22Q9NW64 420 aaKnown RBP eCLIP14.9□□□□□ -0.02
CBWD3-205ENST00000469687 DSEQ9UL01 958 aa14.9□□□□□ -0.02
CBWD3-205ENST00000469687 E9PAM4 449 aa14.89□□□□□ -0.03
CBWD3-205ENST00000469687 F8W8V4 182 aa14.89□□□□□ -0.03
CBWD3-205ENST00000469687 AURKAO14965 403 aa14.89□□□□□ -0.03
CBWD3-205ENST00000469687 MATN3O15232 486 aa14.89□□□□□ -0.03
CBWD3-205ENST00000469687 SKAP2O75563 359 aaPredicted RBP14.89□□□□□ -0.03
CBWD3-205ENST00000469687 CIB2O75838 187 aa14.89□□□□□ -0.03
CBWD3-205ENST00000469687 PDE5AO76074 875 aa14.89□□□□□ -0.03
CBWD3-205ENST00000469687 ACADSP16219 412 aa14.89□□□□□ -0.03
CBWD3-205ENST00000469687 CYP2C18P33260 490 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms