RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 TMX4Q9H1E5 349 aaPredicted RBP5.58□□□□□ -1.52
CACNA1C-223ENST00000465278 TP63Q9H3D4 680 aaPredicted RBP5.58□□□□□ -1.52
CACNA1C-223ENST00000465278 UBE2ZQ9H832 354 aaPredicted RBP5.58□□□□□ -1.52
CACNA1C-223ENST00000465278 ITM2CQ9NQX7 267 aa5.58□□□□□ -1.52
CACNA1C-223ENST00000465278 VPS45Q9NRW7 570 aa5.58□□□□□ -1.52
CACNA1C-223ENST00000465278 ZNHIT2Q9UHR6 403 aa5.58□□□□□ -1.52
CACNA1C-223ENST00000465278 KNSTRNQ9Y448 316 aa5.58□□□□□ -1.52
CACNA1C-223ENST00000465278 ENTPD2Q9Y5L3 495 aa5.58□□□□□ -1.52
CACNA1C-223ENST00000465278 SPTAN1Q13813 2472 aaKnown RBP5.58□□□□□ -1.52
CACNA1C-223ENST00000465278 KALRNO60229 2985 aa5.58□□□□□ -1.52
CACNA1C-223ENST00000465278 KIF20BQ96Q89 1820 aa5.58□□□□□ -1.52
CACNA1C-223ENST00000465278 TICRRQ7Z2Z1 1910 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 HMX3A6NHT5 357 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 KIF28PB7ZC32 967 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 M0QYT0 321 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 CTIFO43310 598 aaKnown RBP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 TMPRSS11DO60235 418 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 PRAMEF2O60811 474 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 PPP6R2O75170 966 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 RPP40O75818 363 aaKnown RBP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 ACTL6BO94805 426 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 ITGA2BP08514 1039 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 TMIGD3P0DMS9 266 aaPredicted RBP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 PPM1FP49593 454 aaPredicted RBP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 DGKQP52824 942 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 PNLIPRP1P54315 467 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 COL10A1Q03692 680 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 SRSF1Q07955 248 aaKnown RBP eCLIP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 DNASE1L3Q13609 305 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 CC2D1BQ5T0F9 858 aaKnown RBP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 ATPAF1Q5TC12 328 aaPredicted RBP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 APOBEC3FQ8IUX4 373 aaKnown RBP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 SFTPA1Q8IWL2 248 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 C12orf76Q8N812 135 aaPredicted RBP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 STT3BQ8TCJ2 826 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 OTUD7AQ8TE49 926 aaPredicted RBP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 WDR60Q8WVS4 1066 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 UROC1Q96N76 676 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 MMS19Q96T76 1030 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 FAM167BQ9BTA0 163 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 MECRQ9BV79 373 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 AGO4Q9HCK5 861 aaKnown RBP5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 SNX15Q9NRS6 342 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 IGF2RP11717 2491 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 SIP14410 1827 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 CEP295Q9C0D2 2601 aa5.57□□□□□ -1.52
CACNA1C-223ENST00000465278 DMXL2Q8TDJ6 3036 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 M0R3H8 397 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 FYB1O15117 783 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 ECE2O60344 883 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 PPP2R1AP30153 589 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 GALNSP34059 522 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 CCR10P46092 362 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 GPC5P78333 572 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 SHC2P98077 582 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 HOXA4Q00056 320 aaPredicted RBP5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 CCDC15Q0P6D6 951 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 HSP90AB3PQ58FF7 597 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 EPHA10Q5JZY3 1008 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 CEP85Q6P2H3 762 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 CLEC4GQ6UXB4 293 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 LDHAL6AQ6ZMR3 332 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 BCDIN3DQ7Z5W3 292 aaKnown RBP5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 ADHFE1Q8IWW8 467 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 PNPLA1Q8N8W4 532 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 CSGALNACT1Q8TDX6 532 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 TBC1D5Q92609 795 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 RBM17Q96I25 401 aaKnown RBP5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 SORCS2Q96PQ0 1159 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 TIMP4Q99727 224 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 RTKNQ9BST9 563 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 VPS16Q9H269 839 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 PABPC3Q9H361 631 aaKnown RBP5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 CCDC134Q9H6E4 229 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 SPTA1P02549 2419 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 ATG2AQ2TAZ0 1938 aa5.56□□□□□ -1.52
CACNA1C-223ENST00000465278 ZBED9Q6R2W3 1325 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 CCDC187A0A096LP49 1063 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 LRRC3CA6NJW4 275 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 TARM1B6A8C7 271 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 CLIC1O00299 241 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 JTBO76095 146 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 C1RP00736 705 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 APEHP13798 732 aaKnown RBP5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 GPD1P21695 349 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 AP2B1P63010 937 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 TXNL4AP83876 142 aaKnown RBP5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 FOXO1Q12778 655 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 RPS6KA2Q15349 733 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 TMEM119Q4V9L6 283 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 ZNF569Q5MCW4 686 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 MAP3K21Q5TCX8 1036 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 DENND2CQ68D51 928 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 ANKRD40Q6AI12 368 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 SERPINA13PQ6UXR4 307 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 SLC44A2Q8IWA5 706 aaPredicted RBP5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 CLASRPQ8N2M8 674 aaKnown RBP5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 TMTC2Q8N394 836 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms