RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 DYRK3O43781 588 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ZMPSTE24O75844 475 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TTC4O95801 387 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 FAM157BP0CG42 384 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 FCER1AP12319 257 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PLS3P13797 630 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CHRNB2P17787 502 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ITIH2P19823 946 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CCNA2P20248 432 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 MMP8P22894 467 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TBXAS1P24557 533 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 GSTM2P28161 218 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 IRS1P35568 1242 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 LIFRP42702 1097 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ETV1P50549 477 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 MLLT10P55197 1068 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ATP6V0D1P61421 351 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PLIN5Q00G26 463 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PMS2P3Q13401 168 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TCIRG1Q13488 830 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 BFSP2Q13515 415 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TAF1CQ15572 869 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 HIF1AQ16665 826 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ZFP69Q49AA0 526 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 EARS2Q5JPH6 523 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ALG1LQ6GMV1 187 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 HMBOX1Q6NT76 420 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TRIM72Q6ZMU5 477 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF704Q6ZNC4 412 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PLEKHG7Q6ZR37 379 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PIWIL3Q7Z3Z3 882 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 NIM1KQ8IY84 436 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 LINC00518Q8N0U6 118 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 OR10Z1Q8NGY1 313 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 VANGL1Q8TAA9 524 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 FANK1Q8TC84 345 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 RASSF5Q8WWW0 418 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ASB12Q8WXK4 309 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PIGBQ92521 554 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 AKAP1Q92667 903 aaKnown RBP eCLIP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ACDQ96AP0 544 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF775Q96BV0 537 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 INTS12Q96CB8 462 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 MCRS1Q96EZ8 462 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 SLC39A13Q96H72 371 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF641Q96N77 438 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 DBNDD2Q9BQY9 259 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 DSCC1Q9BVC3 393 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 C1QTNF7Q9BXJ2 289 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TDRD1Q9BXT4 1180 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 KCNN2Q9H2S1 579 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 MANSC1Q9H8J5 431 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 POLR1BQ9H9Y6 1135 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ACP6Q9NPH0 428 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ITM2CQ9NQX7 267 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ABCB10Q9NRK6 738 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 THG1LQ9NWX6 298 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TMOD3Q9NYL9 352 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 NINJ2Q9NZG7 142 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ZC3H7BQ9UGR2 993 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 SRP68Q9UHB9 627 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 RNF11Q9Y3C5 154 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PCDHGA7Q9Y5G6 932 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 A0A0X1KG70 313 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 LOC100653049A0A140TA62 436 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CCDC195A0A1B0GUA6 201 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ESYT2A0FGR8 921 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PP2D1A8MPX8 630 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CENPXA8MT69 81 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CLDN25C9JDP6 229 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 H3BNH8 94 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 RBAK-RBAKDNI3L0D1 243 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 AGRPO00253 132 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 VWA5AO00534 786 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PODXLO00592 558 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF213O14771 459 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 GAS2O43903 313 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 SSX5O60225 188 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PRDM1O75626 825 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 KRT34O76011 436 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CLPXO76031 633 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ALDH1A2O94788 518 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 IFNA14P01570 189 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 GZMAP12544 262 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 IL1R1P14778 569 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 FOSL2P15408 326 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 BGNP21810 368 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 CASP3P42574 277 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 RPL35P42766 123 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 TRAPPC10P48553 1259 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 PRKAA2P54646 552 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 RPL26P61254 145 aaKnown RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 IFITM3Q01628 133 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 C19orf57Q0VDD7 668 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 NFATC3Q12968 1075 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 AP3B2Q13367 1082 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 RFTN1Q14699 578 aaPredicted RBP3.66□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF846Q147U1 533 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 GRM7Q14831 915 aa3.66□□□□□ -1.82
COL8A1-205ENST00000463753 RAB39AQ14964 217 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms