RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 SNX11Q9Y5W9 270 aa12.17□□□□□ -0.46
RTCB-202ENST00000463455 SLCO1B1Q9Y6L6 691 aa12.17□□□□□ -0.46
RTCB-202ENST00000463455 CHD5Q8TDI0 1954 aa12.17□□□□□ -0.46
RTCB-202ENST00000463455 TBC1D3DA0A087WVF3 549 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 TBC1D3IA0A087WXS9 549 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 TBC1D3EA0A087X179 549 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 TBC1D3KA0A087X1G2 549 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 A0A1W2PQC6 194 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 TBC1D3FA6NER0 549 aaPredicted RBP12.16□□□□□ -0.46
RTCB-202ENST00000463455 ZSCAN5CA6NGD5 496 aaPredicted RBP12.16□□□□□ -0.46
RTCB-202ENST00000463455 TBC1D3LB9A6J9 549 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 SNAP91O60641 907 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 SRGAP2O75044 1071 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 ZMPSTE24O75844 475 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 TBC1D3HP0C7X1 549 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 GPD1P21695 349 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 CHRNA3P32297 505 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 HTR7P34969 479 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 SERPINH1P50454 418 aaKnown RBP12.16□□□□□ -0.46
RTCB-202ENST00000463455 ZNF143P52747 638 aaPredicted RBP12.16□□□□□ -0.46
RTCB-202ENST00000463455 HDAC4P56524 1084 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 ANO6Q4KMQ2 910 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 FILIP1LQ4L180 1135 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 SETMARQ53H47 684 aaPredicted RBP12.16□□□□□ -0.46
RTCB-202ENST00000463455 TBC1D3GQ6DHY5 549 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 TBC1D3CQ6IPX1 549 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 UNQ6494/PRO21346Q6UXR6 183 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.16□□□□□ -0.46
RTCB-202ENST00000463455 NLRP14Q86W24 1093 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 TBC1D3Q8IZP1 549 aaPredicted RBP12.16□□□□□ -0.46
RTCB-202ENST00000463455 MFSD2AQ8NA29 543 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 OR2A12Q8NGT7 310 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 FAM174AQ8TBP5 190 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 SETD7Q8WTS6 366 aaKnown RBP12.16□□□□□ -0.46
RTCB-202ENST00000463455 TBC1D31Q96DN5 1066 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 SERAC1Q96JX3 654 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 SLC6A18Q96N87 628 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 PCDHB18PQ96TA0 734 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 ELF4Q99607 663 aaPredicted RBP12.16□□□□□ -0.46
RTCB-202ENST00000463455 AGPAT1Q99943 283 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 HDAC8Q9BY41 377 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 MAGEH1Q9H213 219 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 ERVMER34-1Q9H9K5 563 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 IL21RQ9HBE5 538 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 GDF3Q9NR23 364 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 DONSONQ9NYP3 566 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 SARDHQ9UL12 918 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 PLXNA2O75051 1894 aa12.16□□□□□ -0.46
RTCB-202ENST00000463455 A0A1B0GTQ1 180 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 A0A1W2PR77 199 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 TCRBV5S1A1TA0A578 114 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 EIF3CLB5ME19 914 aaKnown RBP12.15□□□□□ -0.46
RTCB-202ENST00000463455 CBX4O00257 560 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 DKK1O94907 266 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 MT-CO1P00395 513 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 FTH1P19P0C7X4 201 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 ATP1A3P13637 1013 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 RRM1P23921 792 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 L1CAMP32004 1257 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 RFC1P35251 1148 aaPredicted RBP12.15□□□□□ -0.46
RTCB-202ENST00000463455 FAM193AP78312 1265 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 CNTN1Q12860 1018 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 CDO1Q16878 200 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 C15orf59Q2T9L4 293 aaPredicted RBP12.15□□□□□ -0.46
RTCB-202ENST00000463455 PIP5KL1Q5T9C9 394 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 DNAJC24Q6P3W2 148 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 WDR59Q6PJI9 974 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 KDF1Q8NAX2 398 aaPredicted RBP12.15□□□□□ -0.46
RTCB-202ENST00000463455 OR7D4Q8NG98 312 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 JOSD2Q8TAC2 188 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 FAM172AQ8WUF8 416 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 GATA6Q92908 595 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 LRIG1Q96JA1 1093 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 CAMK1GQ96NX5 476 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 EIF3CQ99613 913 aaKnown RBP12.15□□□□□ -0.46
RTCB-202ENST00000463455 CNPY3Q9BT09 278 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 SYT11Q9BT88 431 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 EDEM3Q9BZQ6 932 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 FAM117AQ9C073 453 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 EBF2Q9HAK2 575 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 ATP13A1Q9HD20 1204 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 DYRK4Q9NR20 520 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 AASDHPPTQ9NRN7 309 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 TMPRSS4Q9NRS4 437 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 ARHGAP20Q9P2F6 1191 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 IL36AQ9UHA7 158 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 NEU3Q9UQ49 428 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 SNX10Q9Y5X0 201 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 IGF2RP11717 2491 aa12.15□□□□□ -0.46
RTCB-202ENST00000463455 COL5A1P20908 1838 aaPredicted RBP12.14□□□□□ -0.47
RTCB-202ENST00000463455 PRAMEF26H0Y7S4 382 aa12.14□□□□□ -0.47
RTCB-202ENST00000463455 H0Y8X5 98 aa12.14□□□□□ -0.47
RTCB-202ENST00000463455 SMAD6O43541 496 aaKnown RBP12.14□□□□□ -0.47
RTCB-202ENST00000463455 HYAL3O43820 417 aaPredicted RBP12.14□□□□□ -0.47
RTCB-202ENST00000463455 RAMP2O60895 175 aa12.14□□□□□ -0.47
RTCB-202ENST00000463455 RTN2O75298 545 aa12.14□□□□□ -0.47
RTCB-202ENST00000463455 LRIG2O94898 1065 aa12.14□□□□□ -0.47
RTCB-202ENST00000463455 CTSLP07711 333 aa12.14□□□□□ -0.47
RTCB-202ENST00000463455 PLEKP08567 350 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms