RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 PLAUP00749 431 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 SERPINC1P01008 464 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 IRF1P10914 325 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 CYP2A6P11509 494 aaPredicted RBP3.38□□□□□ -1.87
VCL-203ENST00000461383 LAMP2P13473 410 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 SLC2A4P14672 509 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 WT1P19544 449 aaPredicted RBP3.38□□□□□ -1.87
VCL-203ENST00000461383 CIITAP33076 1130 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 RGS2P41220 211 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 SOX2P48431 317 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 CLK3P49761 638 aaKnown RBP3.38□□□□□ -1.87
VCL-203ENST00000461383 SNX16P57768 344 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 ZBTB16Q05516 673 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 CUL4AQ13619 759 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 ZNF268Q14587 947 aaPredicted RBP3.38□□□□□ -1.87
VCL-203ENST00000461383 WTAPQ15007 396 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 MED22Q15528 200 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 TAF11Q15544 211 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 GSTA3Q16772 222 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 FBXO43Q4G163 708 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 CDC73Q6P1J9 531 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 RTL10Q7L3V2 364 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 GSTA5Q7RTV2 222 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 SLC46A3Q7Z3Q1 461 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 NEK8Q86SG6 692 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 GPAT4Q86UL3 456 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 FAM160B2Q86V87 743 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 RPAP2Q8IXW5 612 aaPredicted RBP3.38□□□□□ -1.87
VCL-203ENST00000461383 PAQR4Q8N4S7 273 aaPredicted RBP3.38□□□□□ -1.87
VCL-203ENST00000461383 TTC39CQ8N584 583 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 TMEM217Q8N7C4 229 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 AMER2Q8N7J2 671 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 PLD5Q8N7P1 536 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 FRMD1Q8N878 549 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 CADM4Q8NFZ8 388 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 GDPD5Q8WTR4 605 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 FAR1Q8WVX9 515 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 POMGNT1Q8WZA1 660 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 USP6NLQ92738 828 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 NR1H4Q96RI1 486 aaPredicted RBP3.38□□□□□ -1.87
VCL-203ENST00000461383 LBHD1Q9BQE6 289 aaPredicted RBP3.38□□□□□ -1.87
VCL-203ENST00000461383 TM2D2Q9BX73 214 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 ITPAQ9BY32 194 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 GHITMQ9H3K2 345 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 TXNRD2Q9NNW7 524 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 SNTG1Q9NSN8 517 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 C20orf141Q9NUB4 165 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 HCFC1R1Q9NWW0 138 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 EHD2Q9NZN4 543 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 HDAC6Q9UBN7 1215 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 ADD3Q9UEY8 706 aaKnown RBP3.38□□□□□ -1.87
VCL-203ENST00000461383 TBC1D29Q9UFV1 150 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 POLG2Q9UHN1 485 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 ADAM21Q9UKJ8 722 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 ICKQ9UPZ9 632 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 INSL6Q9Y581 213 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 PCDHGB5Q9Y5G0 923 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 LYVE1Q9Y5Y7 322 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 KCNE2Q9Y6J6 123 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 KDM3AQ9Y4C1 1321 aa3.38□□□□□ -1.87
VCL-203ENST00000461383 A0A087X1B8 175 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 CYP2D7A0A087X1C5 515 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.37□□□□□ -1.87
VCL-203ENST00000461383 SLC22A23A1A5C7 686 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 TARSL2A2RTX5 802 aaKnown RBP3.37□□□□□ -1.87
VCL-203ENST00000461383 PABPN1LA6NDY0 278 aaKnown RBP3.37□□□□□ -1.87
VCL-203ENST00000461383 SNAP23O00161 211 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 TMCC2O75069 709 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 STARD3NLO95772 234 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 ADAP00813 363 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 KRT20P35900 424 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 CPOXP36551 454 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 BLKP51451 505 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 YPEL5P62699 121 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 TUBA4AP68366 448 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 OLR1P78380 273 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 PMPCAQ10713 525 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 TMEM115Q12893 351 aaPredicted RBP3.37□□□□□ -1.87
VCL-203ENST00000461383 CHAF1BQ13112 559 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 KLF10Q13118 480 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 RUNX2Q13950 521 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 PPP2R5BQ15173 497 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 ALG10Q5BKT4 473 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 ALG10BQ5I7T1 473 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 SERTAD4-AS1Q5TG53 156 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 TMCO3Q6UWJ1 677 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 MOB3CQ70IA8 216 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 BRINP3Q76B58 766 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 PRSS45Q7RTY3 260 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 MRGPRGQ86SM5 289 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 CCDC105Q8IYK2 499 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 DPP10Q8N608 796 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 ARL14EPQ8N8R7 260 aaPredicted RBP3.37□□□□□ -1.87
VCL-203ENST00000461383 SCFD2Q8WU76 684 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 SNRNP27Q8WVK2 155 aaKnown RBP3.37□□□□□ -1.87
VCL-203ENST00000461383 FAM149B1Q96BN6 582 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 INTS12Q96CB8 462 aaKnown RBP3.37□□□□□ -1.87
VCL-203ENST00000461383 ERP27Q96DN0 273 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 P2RY11Q96G91 374 aa3.37□□□□□ -1.87
VCL-203ENST00000461383 ZNF419Q96HQ0 510 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms