RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 MFHAS1Q9Y4C4 1052 aa22.91■■□□□ 1.26
C9orf3-209ENST00000460573 RALGAPA1Q6GYQ0 2036 aa22.91■■□□□ 1.26
C9orf3-209ENST00000460573 TCRBV21S2A2A0A5A6 115 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 PRAMEF11O60813 436 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 MX2P20592 715 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 IL10RBQ08334 325 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 MEI1Q5TIA1 1274 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 KIAA1211LQ6NV74 962 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 LINGO4Q6UY18 593 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 BZW1Q7L1Q6 419 aaKnown RBP22.9■■□□□ 1.26
C9orf3-209ENST00000460573 ERMP1Q7Z2K6 904 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 RASSF3Q86WH2 238 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 PTPRN2Q92932 1015 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 ISG20Q96AZ6 181 aaKnown RBP22.9■■□□□ 1.26
C9orf3-209ENST00000460573 CCDC114Q96M63 670 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 HHIPQ96QV1 700 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 SP110Q9HB58 689 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 PRSS16Q9NQE7 514 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 OTOGLQ3ZCN5 2332 aa22.9■■□□□ 1.26
C9orf3-209ENST00000460573 hCG_1818297A0A087WSY0 165 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 DDX3YO15523 660 aaKnown RBP22.89■■□□□ 1.25
C9orf3-209ENST00000460573 CD160O95971 181 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 SDHBP21912 280 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 PTPN7P35236 360 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 LMNB2Q03252 620 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 SRSF5Q13243 272 aaKnown RBP22.89■■□□□ 1.25
C9orf3-209ENST00000460573 C9orf64Q5T6V5 341 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 DGLUCYQ7Z3D6 616 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 WDR5BQ86VZ2 330 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 PCDH20Q8N6Y1 951 aaKnown RBP22.89■■□□□ 1.25
C9orf3-209ENST00000460573 PLD5Q8N7P1 536 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 ZNF366Q8N895 744 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 OR2T3Q8NH03 318 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 ALG3Q92685 438 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 ZNF599Q96NL3 588 aa22.89■■□□□ 1.25
C9orf3-209ENST00000460573 UBA2Q9UBT2 640 aaPredicted RBP22.89■■□□□ 1.25
C9orf3-209ENST00000460573 IPO11Q9UI26 975 aaKnown RBP22.89■■□□□ 1.25
C9orf3-209ENST00000460573 PACSIN2Q9UNF0 486 aaPredicted RBP22.89■■□□□ 1.25
C9orf3-209ENST00000460573 FARP1Q9Y4F1 1045 aaPredicted RBP22.89■■□□□ 1.25
C9orf3-209ENST00000460573 MFSD11O43934 449 aa22.88■■□□□ 1.25
C9orf3-209ENST00000460573 C7P10643 843 aa22.88■■□□□ 1.25
C9orf3-209ENST00000460573 MSNP26038 577 aaKnown RBP22.88■■□□□ 1.25
C9orf3-209ENST00000460573 PXNP49023 591 aaPredicted RBP22.88■■□□□ 1.25
C9orf3-209ENST00000460573 NR2C2P49116 596 aa22.88■■□□□ 1.25
C9orf3-209ENST00000460573 SPEM2Q0P670 501 aa22.88■■□□□ 1.25
C9orf3-209ENST00000460573 GALNT2Q10471 571 aa22.88■■□□□ 1.25
C9orf3-209ENST00000460573 PUM1Q14671 1186 aaKnown RBP eCLIP22.88■■□□□ 1.25
C9orf3-209ENST00000460573 RFTN1Q14699 578 aaPredicted RBP22.88■■□□□ 1.25
C9orf3-209ENST00000460573 TMCO4Q5TGY1 634 aa22.88■■□□□ 1.25
C9orf3-209ENST00000460573 C22orf39Q6P5X5 142 aa22.88■■□□□ 1.25
C9orf3-209ENST00000460573 PLPP6Q8IY26 295 aa22.88■■□□□ 1.25
C9orf3-209ENST00000460573 ATPAF2Q8N5M1 289 aa22.88■■□□□ 1.25
C9orf3-209ENST00000460573 RMDN1Q96DB5 314 aa22.88■■□□□ 1.25
C9orf3-209ENST00000460573 PDFQ9HBH1 243 aa22.88■■□□□ 1.25
C9orf3-209ENST00000460573 TRMT1Q9NXH9 659 aaKnown RBP22.88■■□□□ 1.25
C9orf3-209ENST00000460573 BCCIPQ9P287 314 aaKnown RBP eCLIP22.88■■□□□ 1.25
C9orf3-209ENST00000460573 CDV3Q9UKY7 258 aaKnown RBP22.88■■□□□ 1.25
C9orf3-209ENST00000460573 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.88■■□□□ 1.25
C9orf3-209ENST00000460573 SPTBN4Q9H254 2564 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 J3KR12 359 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 K7ERQ8 282 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 ALOX15BO15296 676 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 SMAD6O43541 496 aaKnown RBP22.87■■□□□ 1.25
C9orf3-209ENST00000460573 HRO43593 1189 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 RNASEH1O60930 286 aaKnown RBP22.87■■□□□ 1.25
C9orf3-209ENST00000460573 SIN3BO75182 1162 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 RETP07949 1114 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 PYGMP11217 842 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 GABRG2P18507 467 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 TGM2P21980 687 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 RECQLP46063 649 aaPredicted RBP22.87■■□□□ 1.25
C9orf3-209ENST00000460573 COPAP53621 1224 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 ELAVL3Q14576 367 aaKnown RBP22.87■■□□□ 1.25
C9orf3-209ENST00000460573 RPS6KA1Q15418 735 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 RSPO4Q2I0M5 234 aaPredicted RBP22.87■■□□□ 1.25
C9orf3-209ENST00000460573 ANO7Q6IWH7 933 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 NSMCE1Q8WV22 266 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 HMGB4Q8WW32 186 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 DTLQ9NZJ0 730 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 PYCARDQ9ULZ3 195 aa22.87■■□□□ 1.25
C9orf3-209ENST00000460573 CKAP5Q14008 2032 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 NUP205Q92621 2012 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 PRR5-ARHGAP8B1AHC4 643 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 AXIN1O15169 862 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 KIF5CO60282 957 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 MAFKO60675 156 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 CST8O60676 142 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 RPP40O75818 363 aaKnown RBP22.86■■□□□ 1.25
C9orf3-209ENST00000460573 KRT10P13645 584 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 GARSP41250 739 aaKnown RBP22.86■■□□□ 1.25
C9orf3-209ENST00000460573 ARHGAP8P85298 464 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 GBE1Q04446 702 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 ZBTB16Q05516 673 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 KAZNQ674X7 775 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 TIGD7Q6NT04 549 aaPredicted RBP22.86■■□□□ 1.25
C9orf3-209ENST00000460573 BBS12Q6ZW61 710 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 DSG4Q86SJ6 1040 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 TMPRSS6Q8IU80 811 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 TP53INP2Q8IXH6 220 aa22.86■■□□□ 1.25
C9orf3-209ENST00000460573 PGBD3Q8N328 593 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 213.3 ms