RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 CCR1P32246 355 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 GGCXP38435 758 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 FKBP3Q00688 224 aaKnown RBP23.77■■□□□ 1.4
PTPRA-208ENST00000455631 AUHQ13825 339 aaKnown RBP23.77■■□□□ 1.4
PTPRA-208ENST00000455631 PERM1Q5SV97 790 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 DENND1BQ6P3S1 775 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 LMX1AQ8TE12 382 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 SPATA32Q96LK8 384 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 IL12RB2Q99665 862 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 IPO11Q9UI26 975 aaKnown RBP23.77■■□□□ 1.4
PTPRA-208ENST00000455631 HS3ST3A1Q9Y663 406 aa23.77■■□□□ 1.4
PTPRA-208ENST00000455631 RP1P56715 2156 aa23.76■■□□□ 1.39
PTPRA-208ENST00000455631 SPTY2D1-AS1A0A0U1RR47 76 aa23.76■■□□□ 1.39
PTPRA-208ENST00000455631 K7ERQ8 282 aa23.76■■□□□ 1.39
PTPRA-208ENST00000455631 HSP90AA1P07900 732 aaKnown RBP23.76■■□□□ 1.39
PTPRA-208ENST00000455631 MLLT3P42568 568 aaPredicted RBP23.76■■□□□ 1.39
PTPRA-208ENST00000455631 PRCPP42785 496 aa23.76■■□□□ 1.39
PTPRA-208ENST00000455631 KRT83P78385 493 aa23.76■■□□□ 1.39
PTPRA-208ENST00000455631 SRSF1Q07955 248 aaKnown RBP eCLIP23.76■■□□□ 1.39
PTPRA-208ENST00000455631 EIF4EBP2Q13542 120 aaPredicted RBP23.76■■□□□ 1.39
PTPRA-208ENST00000455631 RRAGAQ7L523 313 aa23.76■■□□□ 1.39
PTPRA-208ENST00000455631 CHST14Q8NCH0 376 aa23.76■■□□□ 1.39
PTPRA-208ENST00000455631 PPP1R16AQ96I34 528 aa23.76■■□□□ 1.39
PTPRA-208ENST00000455631 MED15Q96RN5 788 aa23.76■■□□□ 1.39
PTPRA-208ENST00000455631 KLF15Q9UIH9 416 aa23.76■■□□□ 1.39
PTPRA-208ENST00000455631 SALL4Q9UJQ4 1053 aa23.76■■□□□ 1.39
PTPRA-208ENST00000455631 ATXN7L1Q9ULK2 861 aaPredicted RBP23.76■■□□□ 1.39
PTPRA-208ENST00000455631 CCDC187A0A096LP49 1063 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 FAM237AA0A1B0GTK4 181 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 RIOK3O14730 519 aaKnown RBP23.75■■□□□ 1.39
PTPRA-208ENST00000455631 RAD51BO15315 384 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 SNAP91O60641 907 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 PAK4O96013 591 aaPredicted RBP23.75■■□□□ 1.39
PTPRA-208ENST00000455631 ITGA2BP08514 1039 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 JUNDP17535 347 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 RRM1P23921 792 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 RABIFP47224 123 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 PMS1P54277 932 aaKnown RBP23.75■■□□□ 1.39
PTPRA-208ENST00000455631 CDK17Q00537 523 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 NFKB2Q00653 900 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 PDE1CQ14123 709 aaPredicted RBP23.75■■□□□ 1.39
PTPRA-208ENST00000455631 FGL2Q14314 439 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 ANKRD40Q6AI12 368 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 ARHGAP9Q9BRR9 750 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 SLC4A5Q9BY07 1137 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 HDAC8Q9BY41 377 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 SLC17A9Q9BYT1 436 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 THAP9Q9H5L6 903 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 IL36AQ9UHA7 158 aa23.75■■□□□ 1.39
PTPRA-208ENST00000455631 CASC3O15234 703 aaKnown RBP23.74■■□□□ 1.39
PTPRA-208ENST00000455631 CLDN11O75508 207 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 NEK3P51956 506 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 PDX1P52945 283 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 RPS21P63220 83 aaKnown RBP23.74■■□□□ 1.39
PTPRA-208ENST00000455631 SPIDRQ14159 915 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 TAF5Q15542 800 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 LINC00303Q3SY05 128 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 ARSIQ5FYB1 569 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 KIAA1161Q6NSJ0 714 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 STK32AQ8WU08 396 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 PSMB7Q99436 277 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 C2orf49Q9BVC5 232 aaPredicted RBP23.74■■□□□ 1.39
PTPRA-208ENST00000455631 TNKS2Q9H2K2 1166 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 METTL14Q9HCE5 456 aaKnown RBP23.74■■□□□ 1.39
PTPRA-208ENST00000455631 VPS51Q9UID3 782 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 TBC1D30Q9Y2I9 924 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 HS3ST4Q9Y661 456 aa23.74■■□□□ 1.39
PTPRA-208ENST00000455631 PTPN13Q12923 2485 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 TRIM49BA6NDI0 452 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 TERTO14746 1132 aaKnown RBP23.73■■□□□ 1.39
PTPRA-208ENST00000455631 EFSO43281 561 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 RHOCP08134 193 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 KRT5P13647 590 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 RECQLP46063 649 aaPredicted RBP23.73■■□□□ 1.39
PTPRA-208ENST00000455631 RPIAP49247 311 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 C22orf39Q6P5X5 142 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 LINGO4Q6UY18 593 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 ATG14Q6ZNE5 492 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 USP53Q70EK8 1073 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 ARHGEF19Q8IW93 802 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 DEFB106AQ8N104 65 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 NAT6Q93015 286 aa23.73■■□□□ 1.39
PTPRA-208ENST00000455631 TPP1O14773 563 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 SMAD6O43541 496 aaKnown RBP23.72■■□□□ 1.39
PTPRA-208ENST00000455631 LEFTY1O75610 366 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 GJB6O95452 261 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 ADRB3P13945 408 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 CDH4P55283 916 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 CETN1Q12798 172 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 COLEC12Q5KU26 742 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 TPRG1LQ5T0D9 272 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 TMEM110Q86TL2 294 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 RBFAQ8N0V3 343 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 WDR48Q8TAF3 677 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 EXTL1Q92935 676 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 GLMNQ92990 594 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 FEM1CQ96JP0 617 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 CCDC3Q9BQI4 270 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 BOCQ9BWV1 1114 aa23.72■■□□□ 1.39
PTPRA-208ENST00000455631 GOLPH3LQ9H4A5 285 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms