RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PRR23BQ6ZRT6 265 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 DENND6AQ8IWF6 608 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 FBXO30Q8TB52 745 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 MAPK15Q8TD08 544 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 RNF139Q8WU17 664 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 ZNF512Q96ME7 567 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-204ENST00000449510 C17orf80Q9BSJ5 609 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 SDCBP2Q9H190 292 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 MARCH7Q9H992 704 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 EXOSC4Q9NPD3 245 aaKnown RBP12.57□□□□□ -0.4
UBE3B-204ENST00000449510 GIMAP2Q9UG22 337 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 RAP2CQ9Y3L5 183 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 FADS3Q9Y5Q0 445 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 RGPD5Q99666 1765 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 TMEM247A6NEH6 219 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 E7ENX8 843 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 H0Y626 953 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 CLDN5O00501 218 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 TPD52L2O43399 206 aaKnown RBP12.57□□□□□ -0.4
UBE3B-204ENST00000449510 HCRTO43612 131 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 RNASEH2AO75792 299 aaKnown RBP12.57□□□□□ -0.4
UBE3B-204ENST00000449510 TRIM16O95361 564 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 H6PDO95479 791 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 ZNF182P17025 639 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-204ENST00000449510 MAGEA10P43363 369 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-204ENST00000449510 PGS1Q32NB8 556 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 CAMK1DQ8IU85 385 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 ATPAF2Q8N5M1 289 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 ZNF555Q8NEP9 628 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 OTUD5Q96G74 571 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 GPATCH1Q9BRR8 931 aaKnown RBP12.57□□□□□ -0.4
UBE3B-204ENST00000449510 C1orf50Q9BV19 199 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 HPS4Q9NQG7 708 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 SNTG2Q9NY99 539 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 PCDHGB4Q9UN71 923 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 PCDHGB5Q9Y5G0 923 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 CITO14578 2027 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 FAM95CA0A1B0GW59 222 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 TBC1D4O60343 1298 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 MYL4P12829 197 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 MPP1Q00013 466 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 MS4A2Q01362 244 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 TRIM60Q495X7 471 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 ZNF280DQ6N043 979 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 POTEHQ6S545 545 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 WDTC1Q8N5D0 677 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 CCDC185Q8N715 623 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 RMDN1Q96DB5 314 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 FAM167AQ96KS9 214 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 SIRPGQ9P1W8 387 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 SFMBT1Q9UHJ3 866 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 SNX10Q9Y5X0 201 aa12.57□□□□□ -0.4
UBE3B-204ENST00000449510 MAFGO15525 162 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 RGS5O15539 181 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 MFSD11O43934 449 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 ALDOAP04075 364 aaKnown RBP12.56□□□□□ -0.4
UBE3B-204ENST00000449510 SNRPB2P08579 225 aaKnown RBP12.56□□□□□ -0.4
UBE3B-204ENST00000449510 HSMCR30P0CW71 290 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 PAGE2BQ5JRK9 111 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 SAMD4BQ5PRF9 694 aaKnown RBP12.56□□□□□ -0.4
UBE3B-204ENST00000449510 NAPEPLDQ6IQ20 393 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 TMC5Q6UXY8 1006 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 RALGPS2Q86X27 583 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-204ENST00000449510 NT5DC4Q86YG4 428 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 IFNLR1Q8IU57 520 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-204ENST00000449510 APPL2Q8NEU8 664 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 SPATA22Q8NHS9 363 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 PSMA8Q8TAA3 256 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 CSPG4P5Q96PW8 444 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 OSBPL11Q9BXB4 747 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 OSBPL6Q9BZF3 934 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 C6orf62Q9GZU0 229 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-204ENST00000449510 WDCPQ9H6R7 721 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 TLE6Q9H808 572 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 SPAG4Q9NPE6 437 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 UBAP1Q9NZ09 502 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 ZDHHC2Q9UIJ5 367 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 NDUFAF1Q9Y375 327 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 DHRS12A0PJE2 317 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 KATNA1O75449 491 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 LDLRP01130 860 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 TFAP2AP05549 437 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 GRIA2P42262 883 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 HSD17B4P51659 736 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 NRG1Q02297 640 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-204ENST00000449510 SLC25A11Q02978 314 aaKnown RBP12.56□□□□□ -0.4
UBE3B-204ENST00000449510 TNFAIP2Q03169 654 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 PFKFB4Q16877 469 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 TMEM214Q6NUQ4 689 aaKnown RBP12.56□□□□□ -0.4
UBE3B-204ENST00000449510 TFAP2DQ7Z6R9 452 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 SLC4A11Q8NBS3 891 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 GIPC2Q8TF65 315 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 KCTD14Q9BQ13 255 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-204ENST00000449510 RUBCNLQ9H714 662 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 TIMMDC1Q9NPL8 285 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 SEMA4BQ9NPR2 832 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-204ENST00000449510 EBF1Q9UH73 591 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 FKBP9O95302 570 aa12.56□□□□□ -0.4
UBE3B-204ENST00000449510 FGF3P11487 239 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-204ENST00000449510 MTHFD1P11586 935 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms