RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 SH2D3CQ8N5H7 860 aa17.72■□□□□ 0.43
SGCE-206ENST00000445866 CASKIN2Q8WXE0 1202 aa17.72■□□□□ 0.43
SGCE-206ENST00000445866 AGAP3Q96P47 875 aa17.72■□□□□ 0.43
SGCE-206ENST00000445866 NELL2Q99435 816 aa17.72■□□□□ 0.43
SGCE-206ENST00000445866 L2HGDHQ9H9P8 463 aa17.72■□□□□ 0.43
SGCE-206ENST00000445866 THAP10Q9P2Z0 257 aaPredicted RBP17.72■□□□□ 0.43
SGCE-206ENST00000445866 SEPT3Q9UH03 358 aa17.72■□□□□ 0.43
SGCE-206ENST00000445866 SLC8A2Q9UPR5 921 aa17.72■□□□□ 0.43
SGCE-206ENST00000445866 FCF1Q9Y324 198 aaKnown RBP17.72■□□□□ 0.43
SGCE-206ENST00000445866 NUP210Q8TEM1 1887 aaPredicted RBP17.72■□□□□ 0.43
SGCE-206ENST00000445866 KANSL1LA0AUZ9 987 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 FAM170BA6NMN3 283 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 RNF103O00237 685 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 TMCC1O94876 653 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 SRCP12931 536 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 PTPN3P26045 913 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 MMP13P45452 471 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 NRLP54845 237 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 IFI35P80217 286 aaPredicted RBP17.71■□□□□ 0.43
SGCE-206ENST00000445866 ITKQ08881 620 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 ZNF235Q14590 738 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 UBXN2BQ14CS0 331 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 EGFLAMQ63HQ2 1017 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 METTL3Q86U44 580 aaKnown RBP17.71■□□□□ 0.43
SGCE-206ENST00000445866 TEX26Q8N6G2 289 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 CCDC89Q8N998 374 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 TSEN2Q8NCE0 465 aaKnown RBP17.71■□□□□ 0.43
SGCE-206ENST00000445866 GRK7Q8WTQ7 553 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 CINPQ9BW66 212 aaPredicted RBP17.71■□□□□ 0.43
SGCE-206ENST00000445866 NT5MQ9NPB1 228 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 ZDHHC4Q9NPG8 344 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 AMACRQ9UHK6 382 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 HCN2Q9UL51 889 aa17.71■□□□□ 0.43
SGCE-206ENST00000445866 C5orf60A6NFR6 353 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 TTC34A8MYJ7 566 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 WASH3PC4AMC7 463 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 ATP9BO43861 1147 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 HNRNPLP14866 589 aaKnown RBP eCLIP17.71■□□□□ 0.42
SGCE-206ENST00000445866 KIR2DL1P43626 348 aaPredicted RBP17.71■□□□□ 0.42
SGCE-206ENST00000445866 GDF10P55107 478 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 ZBTB17Q13105 803 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 ZNF234Q14588 700 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 FBXO43Q4G163 708 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 DGKKQ5KSL6 1271 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 CHPFQ8IZ52 775 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.71■□□□□ 0.42
SGCE-206ENST00000445866 ALLCQ8N6M5 410 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 ZNF513Q8N8E2 541 aaPredicted RBP17.71■□□□□ 0.42
SGCE-206ENST00000445866 CCDC26Q8TAB7 109 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 EDAQ92838 391 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 RUNDC3BQ96NL0 473 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 ACOX2Q99424 681 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 VAT1Q99536 393 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 IL12RB2Q99665 862 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 LMAN1LQ9HAT1 526 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 RRAGDQ9NQL2 400 aaPredicted RBP17.71■□□□□ 0.42
SGCE-206ENST00000445866 KLHL8Q9P2G9 620 aaPredicted RBP17.71■□□□□ 0.42
SGCE-206ENST00000445866 PCYOX1Q9UHG3 505 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 TRHDEQ9UKU6 1024 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 MTF2Q9Y483 593 aaPredicted RBP17.71■□□□□ 0.42
SGCE-206ENST00000445866 TTLL3Q9Y4R7 772 aa17.71■□□□□ 0.42
SGCE-206ENST00000445866 ZBTB24O43167 697 aaPredicted RBP17.7■□□□□ 0.42
SGCE-206ENST00000445866 BNIP3LO60238 219 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 GCATO75600 419 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 ETS1P14921 441 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 ACTN2P35609 894 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 WASP42768 502 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 VASPP50552 380 aaPredicted RBP17.7■□□□□ 0.42
SGCE-206ENST00000445866 RHOAP61586 193 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 CCINQ13939 588 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 ANKRD20A2Q5SQ80 823 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 ANKRD20A1Q5TYW2 823 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 ANKRD20A3Q5VUR7 823 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 SDE2Q6IQ49 451 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 SERPINA13PQ6UXR4 307 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 PRUNE1Q86TP1 453 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 ZNF567Q8N184 647 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 CNTD1Q8N815 330 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 KDM1BQ8NB78 822 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 CCDC110Q8TBZ0 833 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 KCNV2Q8TDN2 545 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 ISG20Q96AZ6 181 aaKnown RBP17.7■□□□□ 0.42
SGCE-206ENST00000445866 TEKT5Q96M29 485 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 PSKH2Q96QS6 385 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 TNKS2Q9H2K2 1166 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 HAUS2Q9NVX0 235 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 CACNA2D2Q9NY47 1150 aa17.7■□□□□ 0.42
SGCE-206ENST00000445866 VCANP13611 3396 aa17.69■□□□□ 0.42
SGCE-206ENST00000445866 NPC1O15118 1278 aa17.69■□□□□ 0.42
SGCE-206ENST00000445866 DCXO43602 365 aa17.69■□□□□ 0.42
SGCE-206ENST00000445866 ECEL1O95672 775 aa17.69■□□□□ 0.42
SGCE-206ENST00000445866 ZSCAN5DPP0CG00 497 aa17.69■□□□□ 0.42
SGCE-206ENST00000445866 TRIP13Q15645 432 aaPredicted RBP17.69■□□□□ 0.42
SGCE-206ENST00000445866 KCTD19Q17RG1 926 aaPredicted RBP17.69■□□□□ 0.42
SGCE-206ENST00000445866 MAATS1Q7Z4T9 603 aa17.69■□□□□ 0.42
SGCE-206ENST00000445866 ZNF366Q8N895 744 aa17.69■□□□□ 0.42
SGCE-206ENST00000445866 MYO19Q96H55 970 aa17.69■□□□□ 0.42
SGCE-206ENST00000445866 FOXQ1Q9C009 403 aa17.69■□□□□ 0.42
SGCE-206ENST00000445866 CEP44Q9C0F1 390 aa17.69■□□□□ 0.42
SGCE-206ENST00000445866 TBC1D17Q9HA65 648 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms