RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SPAG4Q9NPE6 437 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 SCUBE2Q9NQ36 999 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 CDH22Q9UJ99 828 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 DPPA5A6NC42 116 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 MYO1GB0I1T2 1018 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 AP2A1O95782 977 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 TKTP29401 623 aaKnown RBP16.86■□□□□ 0.29
TCOF1-206ENST00000445265 PPIDQ08752 370 aaKnown RBP16.86■□□□□ 0.29
TCOF1-206ENST00000445265 TRMT10BQ6PF06 316 aaKnown RBP16.86■□□□□ 0.29
TCOF1-206ENST00000445265 EFCAB3Q8N7B9 438 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 GRIP2Q9C0E4 1043 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 CAB39LQ9H9S4 337 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 TLR8Q9NR97 1041 aaKnown RBP16.86■□□□□ 0.29
TCOF1-206ENST00000445265 CLDN5O00501 218 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 CYBBP04839 570 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 PRDX6P30041 224 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 HUNKP57058 714 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 FOLH1Q04609 750 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 CERCAMQ5T4B2 595 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 RFWD3Q6PCD5 774 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 TTC23LQ6PF05 361 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 NETO2Q8NC67 525 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 SLC4A5Q9BY07 1137 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 CLPBQ9H078 707 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 SLC13A4Q9UKG4 626 aa16.86■□□□□ 0.29
TCOF1-206ENST00000445265 SMIM28A0A1B0GU29 152 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 DPYSL4O14531 572 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 EDIL3O43854 480 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 SP100P23497 879 aaPredicted RBP16.85■□□□□ 0.29
TCOF1-206ENST00000445265 POLD3Q15054 466 aaPredicted RBP16.85■□□□□ 0.29
TCOF1-206ENST00000445265 DPYSL2Q16555 572 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 INTS6LQ5JSJ4 861 aaKnown RBP16.85■□□□□ 0.29
TCOF1-206ENST00000445265 THEMIS2Q5TEJ8 643 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 ZNF280DQ6N043 979 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 FAM35AQ86V20 835 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 CAMK1DQ8IU85 385 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 MARK4Q96L34 752 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 MTG1Q9BT17 334 aaPredicted RBP16.85■□□□□ 0.29
TCOF1-206ENST00000445265 GBA2Q9HCG7 927 aaPredicted RBP16.85■□□□□ 0.29
TCOF1-206ENST00000445265 PCDHB5Q9Y5E4 795 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 LBPP18428 481 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 OR1E1P30953 314 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 NR6A1Q15406 480 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 ARHGAP17Q68EM7 881 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 ARHGAP22Q7Z5H3 698 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 MYO1HQ8N1T3 1032 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 SNX31Q8N9S9 440 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 OMDQ99983 421 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 ALG9Q9H6U8 611 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 CDH5P33151 784 aaPredicted RBP16.85■□□□□ 0.29
TCOF1-206ENST00000445265 SCNN1BP51168 640 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 NR1H2P55055 460 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 SLC18A2Q05940 514 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 CTBP1Q13363 440 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 KCNJ11Q14654 390 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 SEMA6AQ9H2E6 1030 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 CFAP99D6REC4 459 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 NRF1Q16656 503 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 CYP51A1Q16850 503 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 PPM1JQ5JR12 505 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 SH3PXD2AQ5TCZ1 1133 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 C9orf131Q5VYM1 1079 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 OR56A4Q8NGH8 313 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 OR9Q1Q8NGQ5 310 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 DDX18Q9NVP1 670 aaKnown RBP16.85■□□□□ 0.29
TCOF1-206ENST00000445265 DTLQ9NZJ0 730 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 CPA4Q9UI42 421 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 TEX264Q9Y6I9 313 aa16.85■□□□□ 0.29
TCOF1-206ENST00000445265 CACNA1SQ13698 1873 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 PGM3O95394 542 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 IRF1P10914 325 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 DARSP14868 501 aaKnown RBP16.84■□□□□ 0.29
TCOF1-206ENST00000445265 TFEBP19484 476 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 IFNA8P32881 189 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 FOXD4Q12950 439 aaPredicted RBP16.84■□□□□ 0.29
TCOF1-206ENST00000445265 SMYD5Q6GMV2 418 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 HPS6Q86YV9 775 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 CCDC185Q8N715 623 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 VPS37AQ8NEZ2 397 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 POLR1EQ9GZS1 481 aaKnown RBP16.84■□□□□ 0.29
TCOF1-206ENST00000445265 PCDHB12Q9Y5F1 795 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 H7C4K7 107 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 TYROBPO43914 113 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 CELF2O95319 508 aaKnown RBP16.84■□□□□ 0.29
TCOF1-206ENST00000445265 RHOCP08134 193 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 MSS51Q4VC12 460 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 FAM45BPQ6NSW5 357 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 PLD3Q8IV08 490 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 FAM45AQ8TCE6 357 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 WDR55Q9H6Y2 383 aaPredicted RBP16.84■□□□□ 0.29
TCOF1-206ENST00000445265 NENFQ9UMX5 172 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 CRYL1Q9Y2S2 319 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 MTF2Q9Y483 593 aaPredicted RBP16.84■□□□□ 0.29
TCOF1-206ENST00000445265 CNTNAP1P78357 1384 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 LYNP07948 512 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 IVDP26440 423 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 PLIN5Q00G26 463 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 SP2Q02086 613 aa16.84■□□□□ 0.29
TCOF1-206ENST00000445265 FAM98BQ52LJ0 330 aaKnown RBP16.84■□□□□ 0.29
TCOF1-206ENST00000445265 C15orf39Q6ZRI6 1047 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms