RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 VWA8A3KMH1 1905 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 SPAG7O75391 227 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 ALDH1A2O94788 518 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 HLA-DQB2P05538 268 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 SERPINF2P08697 491 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 MYL4P12829 197 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 KRT4P19013 534 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 HLA-DPA1P20036 260 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 ALDH3A1P30838 453 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 CD68P34810 354 aaPredicted RBP6.12□□□□□ -1.43
VPS50-205ENST00000441602 WNT3AP56704 352 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 TNK2Q07912 1038 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 EFTUD2Q15029 972 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS50-205ENST00000441602 DBN1Q16643 649 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 ALFQ53S48 1182 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 TMEM240Q5SV17 173 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 KCTD11Q693B1 232 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 PKN3Q6P5Z2 889 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 TIFABQ6ZNK6 161 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 OTOP3Q7RTS5 596 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 TP53INP2Q8IXH6 220 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 LMNTD2Q8IXW0 634 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 CYP4X1Q8N118 509 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 PAF1Q8N7H5 531 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 TMA16Q96EY4 203 aaKnown RBP6.12□□□□□ -1.43
VPS50-205ENST00000441602 TGS1Q96RS0 853 aaKnown RBP6.12□□□□□ -1.43
VPS50-205ENST00000441602 TCF25Q9BQ70 676 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 MUC3BQ9H195 1237 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 C20orf96Q9NUD7 363 aaPredicted RBP6.12□□□□□ -1.43
VPS50-205ENST00000441602 MKS1Q9NXB0 559 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 MOCS1Q9NZB8 636 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 NEU3Q9UQ49 428 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 LTBP2Q14767 1821 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 H0Y626 953 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 PFDN6O15212 129 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 GLRA3O75311 464 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 CNTN5O94779 1100 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 FGF1P05230 155 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 CNPP09543 421 aaKnown RBP6.12□□□□□ -1.43
VPS50-205ENST00000441602 HNRNPA1P09651 372 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS50-205ENST00000441602 TROVE2P10155 538 aaKnown RBP eCLIP6.12□□□□□ -1.43
VPS50-205ENST00000441602 POLD2P49005 469 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 SERPINB8P50452 374 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 SERPINH1P50454 418 aaKnown RBP6.12□□□□□ -1.43
VPS50-205ENST00000441602 MPPE1Q53F39 396 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 PACS1Q6VY07 963 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 CCDC121Q6ZUS5 278 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 KCNMB4Q86W47 210 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 PPP1R14CQ8TAE6 165 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 GDAP1Q8TB36 358 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 SP7Q8TDD2 431 aaPredicted RBP6.12□□□□□ -1.43
VPS50-205ENST00000441602 AUTS2Q8WXX7 1259 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 FEM1CQ96JP0 617 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 ATXN3LQ9H3M9 355 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 NR2E3Q9Y5X4 410 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 ZFP37Q9Y6Q3 630 aaPredicted RBP6.12□□□□□ -1.43
VPS50-205ENST00000441602 ZNF197O14709 1029 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 KDELR3O43731 214 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 FAM155BO75949 473 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 F11P03951 625 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 PTPN2P17706 415 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 GCAP28676 217 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 MAPK8P45983 427 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 SLC12A2P55011 1212 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 SLC18A2Q05940 514 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 CDH18Q13634 790 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 TAF1BQ53T94 588 aaPredicted RBP6.12□□□□□ -1.43
VPS50-205ENST00000441602 RALGPS1Q5JS13 557 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 ATG16L1Q676U5 607 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 RETSATQ6NUM9 610 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 MPP5Q8N3R9 675 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 TEX26Q8N6G2 289 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 OTUD6BQ8N6M0 293 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 DNAJC5GQ8N7S2 189 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 CNTD1Q8N815 330 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 IMP4Q96G21 291 aaKnown RBP6.12□□□□□ -1.43
VPS50-205ENST00000441602 RANBP9Q96S59 729 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 APOL2Q9BQE5 337 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 WDR83Q9BRX9 315 aaKnown RBP6.12□□□□□ -1.43
VPS50-205ENST00000441602 KIFC1Q9BW19 673 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 TLR9Q9NR96 1032 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 SMPD4Q9NXE4 827 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 UBP1Q9NZI7 540 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 GRID1Q9ULK0 1009 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 TCAF1Q9Y4C2 921 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 ARIH1Q9Y4X5 557 aaPredicted RBP6.12□□□□□ -1.43
VPS50-205ENST00000441602 IRAK3Q9Y616 596 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 CPQQ9Y646 472 aa6.12□□□□□ -1.43
VPS50-205ENST00000441602 TCP11X1B4DZS4 312 aa6.11□□□□□ -1.43
VPS50-205ENST00000441602 TGM5O43548 720 aa6.11□□□□□ -1.43
VPS50-205ENST00000441602 TBL1XO60907 577 aa6.11□□□□□ -1.43
VPS50-205ENST00000441602 LILRB3O75022 631 aa6.11□□□□□ -1.43
VPS50-205ENST00000441602 USP12O75317 370 aa6.11□□□□□ -1.43
VPS50-205ENST00000441602 LUC7L3O95232 432 aaKnown RBP6.11□□□□□ -1.43
VPS50-205ENST00000441602 EPOP01588 193 aa6.11□□□□□ -1.43
VPS50-205ENST00000441602 MPOP05164 745 aa6.11□□□□□ -1.43
VPS50-205ENST00000441602 HOXB8P17481 243 aaPredicted RBP6.11□□□□□ -1.43
VPS50-205ENST00000441602 DRD4P21917 467 aa6.11□□□□□ -1.43
VPS50-205ENST00000441602 ITGB8P26012 769 aa6.11□□□□□ -1.43
VPS50-205ENST00000441602 GRIA1P42261 906 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms