RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 CHST14Q8NCH0 376 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 SAP25Q8TEE9 199 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 CNDP2Q96KP4 475 aaKnown RBP18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 SELENOOQ9BVL4 669 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 CEP44Q9C0F1 390 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 ADAM22Q9P0K1 906 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 SIK3Q9Y2K2 1263 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 IGF2RP11717 2491 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 ZFHX4Q86UP3 3567 aa18.85■□□□□ 0.61
AC004540.1-201ENST00000439120 COL5A1P20908 1838 aaPredicted RBP18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 CFAP47Q6ZTR5 3102 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 A0A1W2PQU0 124 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 ANKRD62A6NC57 917 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 LGALS16A8MUM7 142 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 ENC1O14682 589 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 SLC31A1O15431 190 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 DKK1O94907 266 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 PCDH8O95206 1070 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 CALB1P05937 261 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 KRT3P12035 628 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 ADRA1BP35368 520 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 PTPN9P43378 593 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 TAS2R38P59533 333 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 CCDC14Q49A88 953 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 DPY19L3Q6ZPD9 716 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 ERN2Q76MJ5 926 aaKnown RBP18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 STRADAQ7RTN6 431 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 PCDH20Q8N6Y1 951 aaKnown RBP18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 JOSD2Q8TAC2 188 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 ARRDC3Q96B67 414 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 MYOCQ99972 504 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 LIMA1Q9UHB6 759 aaKnown RBP18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 HPCAL4Q9UM19 191 aa18.84■□□□□ 0.61
AC004540.1-201ENST00000439120 C2CD4BA6NLJ0 364 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 LEFTY1O75610 366 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 AKT2P31751 481 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 GEMIN4P57678 1058 aaKnown RBP18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 SHBQ15464 509 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 DHRS13Q6UX07 377 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 HORMAD1Q86X24 394 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 PROSER1Q86XN7 944 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 FAM172AQ8WUF8 416 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 KLK6Q92876 244 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 KLHDC7BQ96G42 594 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 HDAC8Q9BY41 377 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 RETREG1Q9H6L5 497 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 ZNF212Q9UDV6 495 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 DNAI1Q9UI46 699 aa18.83■□□□□ 0.6
AC004540.1-201ENST00000439120 PLXNB3Q9ULL4 1909 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 GJB6O95452 261 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 UNGP13051 313 aaPredicted RBP18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 PRLRP16471 622 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 RHOQP17081 205 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 DESP17661 470 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 GPD1P21695 349 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 RXRGP48443 463 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 MAPKAPK2P49137 400 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 NEK3P51956 506 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 NRG1Q02297 640 aaPredicted RBP18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 BNIP3Q12983 259 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 CLEC16AQ2KHT3 1053 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 RAB6CQ53S08 254 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 CARD16Q5EG05 197 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 FBXL19Q6PCT2 694 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 SPATS2Q86XZ4 545 aaKnown RBP18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 ZNF354CQ86Y25 554 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 RYBPQ8N488 228 aaPredicted RBP18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 TBC1D31Q96DN5 1066 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 HEPHQ9BQS7 1158 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 RAB6CQ9H0N0 254 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 OSBPL2Q9H1P3 480 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 ZDHHC6Q9H6R6 413 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 CA5BQ9Y2D0 317 aa18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 FCF1Q9Y324 198 aaKnown RBP18.82■□□□□ 0.6
AC004540.1-201ENST00000439120 RFPL3O75679 317 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 ZMPSTE24O75844 475 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 MBD3O95983 291 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 PLEKP08567 350 aaPredicted RBP18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 CCDC172P0C7W6 258 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 THEGLP0DJG4 465 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 CDK4P11802 303 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 HNRNPA2B1P22626 353 aaKnown RBP18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 HNF1BP35680 557 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 CCNHP51946 323 aaPredicted RBP18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 ARF5P84085 180 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 POLD3Q15054 466 aaPredicted RBP18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 HS1BP3Q53T59 392 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 DNAJC24Q6P3W2 148 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 PHF13Q86YI8 300 aaPredicted RBP18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 C3orf20Q8ND61 904 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 MDM1Q8TC05 714 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 PCDHB18PQ96TA0 734 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 TM6SF2Q9BZW4 377 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 RALYQ9UKM9 306 aaKnown RBP18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 PCDHGA1Q9Y5H4 931 aa18.81■□□□□ 0.6
AC004540.1-201ENST00000439120 FAM149AA5PLN7 773 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 RAMP2O60895 175 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 SDC3O75056 442 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 LRIG2O94898 1065 aa18.8■□□□□ 0.6
AC004540.1-201ENST00000439120 C1SP09871 688 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms