RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 MAPK7Q13164 816 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 DDX10Q13206 875 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 LAMB3Q13751 1172 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 TWIST1Q15672 202 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 SH2D4BQ5SQS7 431 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 MANEAQ5SRI9 462 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 INTS11Q5TA45 600 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 TRAPPC11Q7Z392 1133 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 IRF2BP2Q7Z5L9 587 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 WDR5BQ86VZ2 330 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 LSM14AQ8ND56 463 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 SETD9Q8NE22 299 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 ZNF548Q8NEK5 533 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 RFWD2Q8NHY2 731 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 NOC3LQ8WTT2 800 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 FCRL4Q96PJ5 515 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 SLC26A6Q9BXS9 759 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 MROH8Q9H579 483 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 FZD3Q9NPG1 666 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 ZDHHC7Q9NXF8 308 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 GRHL1Q9NZI5 618 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 COG5Q9UP83 839 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 A0A1W2PPC1 479 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 C17orf102A2RUQ5 167 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 FAM90A7PA6NKC0 464 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 A6NNC1 897 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 FAM90A22PA8MWA6 464 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 FAM90A12PA8MX19 464 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 FAM90A23PA8MXZ1 464 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 MDM4O15151 490 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 RNMTO43148 476 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 ATG13O75143 517 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 CBX6O95503 412 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 IFNA2P01563 188 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 KLKB1P03952 638 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 CHRM4P08173 479 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 CHRNB1P11230 501 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 TBXAS1P24557 533 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 GEMIN4P57678 1058 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 KRTAP10-11P60412 298 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 ASPHD1Q5U4P2 390 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 HMBOX1Q6NT76 420 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 GHDCQ8N2G8 530 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 Q8N9P0 234 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 PPHLN1Q8NEY8 458 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 CMASQ8NFW8 434 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 RAB40AQ8WXH6 277 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 HTRA1Q92743 480 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 SKA1Q96BD8 255 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 HVCN1Q96D96 273 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 HMCESQ96FZ2 354 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 NLRP4Q96MN2 994 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 FOXP1Q9H334 677 aaPredicted RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 ZHX3Q9H4I2 956 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 UBN1Q9NPG3 1134 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 ENTPD7Q9NQZ7 604 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 SMC4Q9NTJ3 1288 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 POT1Q9NUX5 634 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 HDAC6Q9UBN7 1215 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 CNOT7Q9UIV1 285 aaKnown RBP3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 HSF4Q9ULV5 492 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 TBX20Q9UMR3 447 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 CNPY2Q9Y2B0 182 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 CLDN16Q9Y5I7 305 aa3.95□□□□□ -1.78
TRAPPC13-204ENST00000438419 IGLV5-39A0A0G2JS06 123 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 GOLGA6L10A0A0M3HER8 536 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 NDUFB8O95169 186 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 EPN2O95208 641 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 MBD4O95243 580 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 SYF2O95926 243 aaKnown RBP3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 UNGP13051 313 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 ATP1A3P13637 1013 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 TNFRSF1BP20333 461 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 YWHAQP27348 245 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 DDIT3P35638 169 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 LIFRP42702 1097 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 NAA25Q14CX7 972 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 RPE65Q16518 533 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 SLC18A3Q16572 532 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 WDR78Q5VTH9 848 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 RSRC2Q7L4I2 434 aaKnown RBP3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 ADGRG6Q86SQ4 1221 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 CAMK1DQ8IU85 385 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 ZDHHC23Q8IYP9 409 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 ZNF366Q8N895 744 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 TMEM174Q8WUU8 243 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 CNOT9Q92600 299 aaKnown RBP3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 RRP36Q96EU6 259 aaKnown RBP3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 VCPIP1Q96JH7 1222 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 ZNF333Q96JL9 665 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 PHF7Q9BWX1 381 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 EPHX3Q9H6B9 360 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 ATP8A2Q9NTI2 1148 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 ARHGAP26Q9UNA1 814 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 RAP2CQ9Y3L5 183 aa3.94□□□□□ -1.78
TRAPPC13-204ENST00000438419 KAT6BQ8WYB5 2073 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 A0A0A0MQY5 61 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 TMEM272A0A1B0GTI8 110 aa3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 HMGB1P1B2RPK0 211 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC13-204ENST00000438419 ADAP00813 363 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms