RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 FRS2Q8WU20 508 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 KLHDC7BQ96G42 594 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 MYOCQ99972 504 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 CALN1Q9BXU9 219 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 TKTL2Q9H0I9 626 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 WDCPQ9H6R7 721 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.95□□□□□ -1.14
VPS50-203ENST00000436177 DNAJC12Q9UKB3 198 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 GTF3C3Q9Y5Q9 886 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 HS3ST4Q9Y661 456 aa7.95□□□□□ -1.14
VPS50-203ENST00000436177 ASXL3Q9C0F0 2248 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 A0A1W2PQU0 124 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 BECN2A8MW95 431 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 GOLGA8SH3BPF8 625 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 CBX4O00257 560 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 NEMP1O14524 444 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 SLC31A1O15431 190 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 FFAR2O15552 330 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 RNGTTO60942 597 aaKnown RBP7.94□□□□□ -1.14
VPS50-203ENST00000436177 GADD45BO75293 160 aaPredicted RBP7.94□□□□□ -1.14
VPS50-203ENST00000436177 LSM8O95777 96 aaKnown RBP7.94□□□□□ -1.14
VPS50-203ENST00000436177 TPM2P07951 284 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 THEGLP0DJG4 465 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 CKMT2P17540 419 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 PON1P27169 355 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 OR1E1P30953 314 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 CHRNA3P32297 505 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 ETFBP38117 255 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 RXRGP48443 463 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 METAP1P53582 386 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 UBE2HP62256 183 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 INSM1Q01101 510 aaPredicted RBP7.94□□□□□ -1.14
VPS50-203ENST00000436177 APBA1Q02410 837 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 PTPN20Q4JDL3 420 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 NEK5Q6P3R8 708 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 C22orf39Q6P5X5 142 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 PTAR1Q7Z6K3 402 aaPredicted RBP7.94□□□□□ -1.14
VPS50-203ENST00000436177 SETD3Q86TU7 594 aaPredicted RBP7.94□□□□□ -1.14
VPS50-203ENST00000436177 SLC47A2Q86VL8 602 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 HORMAD1Q86X24 394 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 SH2D3CQ8N5H7 860 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 C18orf8Q96DM3 657 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 SPON2Q9BUD6 331 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 EBF2Q9HAK2 575 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 PIGVQ9NUD9 493 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 VPS51Q9UID3 782 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 SARDHQ9UL12 918 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 PPM1HQ9ULR3 514 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 HS3ST2Q9Y278 367 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 TBC1D30Q9Y2I9 924 aa7.94□□□□□ -1.14
VPS50-203ENST00000436177 FLNBO75369 2602 aaKnown RBP7.93□□□□□ -1.14
VPS50-203ENST00000436177 A0A087WV48 116 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 NEMP2A6NFY4 417 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 A6NNZ2 444 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 H3BM21 787 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 FOXN3O00409 490 aaPredicted RBP7.93□□□□□ -1.14
VPS50-203ENST00000436177 WNT9AO14904 365 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 WIPF1O43516 503 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 SNAP91O60641 907 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 SRGAP2O75044 1071 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 CAPNS1P04632 268 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 SRCP12931 536 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 HNRNPA2B1P22626 353 aaKnown RBP7.93□□□□□ -1.14
VPS50-203ENST00000436177 GLDCP23378 1020 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 RRM1P23921 792 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 SCNN1AP37088 669 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 CXCR3P49682 368 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 IRAK1P51617 712 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 NEK3P51956 506 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 GEMIN4P57678 1058 aaKnown RBP7.93□□□□□ -1.14
VPS50-203ENST00000436177 E2F1Q01094 437 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 TARDBPQ13148 414 aaKnown RBP eCLIP7.93□□□□□ -1.14
VPS50-203ENST00000436177 ZNF211Q13398 564 aaPredicted RBP7.93□□□□□ -1.14
VPS50-203ENST00000436177 SHBQ15464 509 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 ARL13BQ3SXY8 428 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 SLC25A52Q3SY17 297 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 SFMBT2Q5VUG0 894 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 TAF3Q5VWG9 929 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 FBXL19Q6PCT2 694 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 LINGO4Q6UY18 593 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 ERN2Q76MJ5 926 aaKnown RBP7.93□□□□□ -1.14
VPS50-203ENST00000436177 ERICH1Q86X53 443 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 SPATS2Q86XZ4 545 aaKnown RBP7.93□□□□□ -1.14
VPS50-203ENST00000436177 DRC7Q8IY82 874 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 FAM71AQ8IYT1 594 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 RYBPQ8N488 228 aaPredicted RBP7.93□□□□□ -1.14
VPS50-203ENST00000436177 WDTC1Q8N5D0 677 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 TMIEQ8NEW7 156 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 ZNF397Q8NF99 534 aaPredicted RBP7.93□□□□□ -1.14
VPS50-203ENST00000436177 KLK6Q92876 244 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 ABCG4Q9H172 646 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 TNKS2Q9H2K2 1166 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 NDST4Q9H3R1 872 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 ATP13A1Q9HD20 1204 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 PLCB1Q9NQ66 1216 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 KLHL11Q9NVR0 708 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 DNAJC28Q9NX36 388 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 IL36AQ9UHA7 158 aa7.93□□□□□ -1.14
VPS50-203ENST00000436177 IPO11Q9UI26 975 aaKnown RBP7.93□□□□□ -1.14
VPS50-203ENST00000436177 CLCA2Q9UQC9 943 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms