RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 LINGO4Q6UY18 593 aa11.87□□□□□ -0.51
CHRNA1-207ENST00000435083 DCP2Q8IU60 420 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-207ENST00000435083 GRIN3AQ8TCU5 1115 aa11.87□□□□□ -0.51
CHRNA1-207ENST00000435083 PSMB7Q99436 277 aa11.87□□□□□ -0.51
CHRNA1-207ENST00000435083 C2orf49Q9BVC5 232 aaPredicted RBP11.87□□□□□ -0.51
CHRNA1-207ENST00000435083 TNKS2Q9H2K2 1166 aa11.87□□□□□ -0.51
CHRNA1-207ENST00000435083 IPO11Q9UI26 975 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-207ENST00000435083 VPS51Q9UID3 782 aa11.87□□□□□ -0.51
CHRNA1-207ENST00000435083 ZNF462Q96JM2 2506 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 POM121BA6NF01 834 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 HSF2BPO75031 334 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 ENDOD1O94919 500 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 PAK4O96013 591 aaPredicted RBP11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 AFPP02771 609 aaKnown RBP11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 C6P13671 934 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 TGM2P21980 687 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 USP8P40818 1118 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 RECQLP46063 649 aaPredicted RBP11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 MTA1Q13330 715 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 ZCCHC8Q6NZY4 707 aaKnown RBP11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 FOXR1Q6PIV2 292 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 CRTC1Q6UUV9 634 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 EFL1Q7Z2Z2 1120 aaKnown RBP11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 ZNF548Q8NEK5 533 aaPredicted RBP11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 FAM174AQ8TBP5 190 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 TTC9Q92623 222 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 ATXN7L3BQ96GX2 97 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 PPP1R16AQ96I34 528 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 PPP1R13BQ96KQ4 1090 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 CPXM1Q96SM3 734 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 SLC17A9Q9BYT1 436 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 ASNSD1Q9NWL6 643 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 IL36AQ9UHA7 158 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 HS3ST3A1Q9Y663 406 aa11.86□□□□□ -0.51
CHRNA1-207ENST00000435083 ASH1LQ9NR48 2969 aaKnown RBP11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 H3BM21 787 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 M0QYT0 321 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 NEK3P51956 506 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 FZD2Q14332 565 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 ARHGAP44Q17R89 818 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 DEFB133Q30KQ1 61 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 TMEM259Q4ZIN3 620 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 ALFQ53S48 1182 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 KIAA1614Q5VZ46 1190 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 TTI2Q6NXR4 508 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 GUSBP11Q6P575 273 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 C22orf39Q6P5X5 142 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 GJB7Q6PEY0 223 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 C11orf57Q6ZUT1 292 aaPredicted RBP11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 FAM183BPQ6ZVS7 135 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 PASD1Q8IV76 773 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 TRIM59Q8IWR1 403 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 WDTC1Q8N5D0 677 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 LMX1AQ8TE12 382 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 FEM1CQ96JP0 617 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 SLC46A1Q96NT5 459 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 HDAC8Q9BY41 377 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 CLMPQ9H6B4 373 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 HOOK1Q9UJC3 728 aaKnown RBP11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 ENTPD2Q9Y5L3 495 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 SNX10Q9Y5X0 201 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 TRPM6Q9BX84 2022 aa11.85□□□□□ -0.51
CHRNA1-207ENST00000435083 SPTY2D1-AS1A0A0U1RR47 76 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 A0A1W2PNU3 283 aaPredicted RBP11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 CYSRT1A8MQ03 144 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 RAD51BO15315 384 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 AQP9O43315 295 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 LEFTY1O75610 366 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 ADCY5O95622 1261 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 CSF2P04141 144 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 KRT10P13645 584 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 NOS2P35228 1153 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 PPP1R2P41236 205 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 DNA2P51530 1060 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 CLCN6P51797 869 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 RPS21P63220 83 aaKnown RBP11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 FGL2Q14314 439 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 C5orf22Q49AR2 442 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 KIAA1161Q6NSJ0 714 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 IGF2-ASQ6U949 168 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 KYAT3Q6YP21 454 aaKnown RBP11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 DPY19L3Q6ZPD9 716 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 TFAP2DQ7Z6R9 452 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 PARGQ86W56 976 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 DCAF4L2Q8NA75 395 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 SNRNP27Q8WVK2 155 aaKnown RBP11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 NELFBQ8WX92 580 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 CCDC97Q96F63 343 aaPredicted RBP11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 SPON2Q9BUD6 331 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 TKTL2Q9H0I9 626 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 WDCPQ9H6R7 721 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 WDR70Q9NW82 654 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 NCKIPSDQ9NZQ3 722 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 MAN1B1Q9UKM7 699 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 CTNND2Q9UQB3 1225 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 CSNK1G3Q9Y6M4 447 aa11.84□□□□□ -0.51
CHRNA1-207ENST00000435083 WASF2Q9Y6W5 498 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms