RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 BNC1Q01954 994 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 CHI3L2Q15782 390 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 SBK1Q52WX2 424 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 C12orf60Q5U649 245 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ARHGEF16Q5VV41 709 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ABRAXAS1Q6UWZ7 409 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZBTB49Q6ZSB9 765 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 LYSMD2Q8IV50 215 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC9A9Q8IVB4 645 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 NUDCD3Q8IVD9 361 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 SCML4Q8N228 414 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ANKFN1Q8N957 763 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 TDRD5Q8NAT2 981 aaKnown RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 KYQ8NBH2 561 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 IL17RDQ8NFM7 739 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 PJA1Q8NG27 643 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 TGFBRAP1Q8WUH2 860 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 RAD54LQ92698 747 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 HTRA1Q92743 480 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 APBB2Q92870 758 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZFYVE19Q96K21 471 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZNF578Q96N58 590 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 KIFC1Q9BW19 673 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 GPR88Q9GZN0 384 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 DNAJC28Q9NX36 388 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 MARCOQ9UEW3 520 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-206ENST00000429440 IP6K2Q9UHH9 426 aa9□□□□□ -0.97
CDC42BPA-206ENST00000429440 DDX60LQ5H9U9 1706 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 CLUHO75153 1309 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 ADAM11O75078 769 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 ATG13O75143 517 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 BCAS1O75363 584 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 DNAJB5O75953 348 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 RETP07949 1114 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 RALBP11234 206 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 ARNTP27540 789 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 RPL10P27635 214 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 NPTX2P47972 431 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 MS4A2Q01362 244 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 BFSP1Q12934 665 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 NEDD8Q15843 81 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 TYSND1Q2T9J0 566 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 TEDDM1Q5T9Z0 273 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 PDPK2PQ6A1A2 396 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SDE2Q6IQ49 451 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZNF773Q6PK81 442 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZNF438Q7Z4V0 828 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SNX29P2Q8IUI4 249 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SHCBP1Q8NEM2 672 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 BEST2Q8NFU1 509 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 OR7D4Q8NG98 312 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 OR6Q1Q8NGQ2 317 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 RHOXF1Q8NHV9 184 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 FANK1Q8TC84 345 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZFPM2Q8WW38 1151 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC5A5Q92911 643 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 TOP1MTQ969P6 601 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 DNAJC19Q96DA6 116 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 TSNARE1Q96NA8 513 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 KLHL32Q96NJ5 620 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 JMJD4Q9H9V9 463 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 CD93Q9NPY3 652 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 POLE4Q9NR33 117 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 CYP26B1Q9NR63 512 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC39A1Q9NY26 324 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 MAT2BQ9NZL9 334 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 EIF3KQ9UBQ5 218 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 VWA7Q9Y334 891 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 LOC100653049A0A140TA62 436 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 PDZK1P1A8MUH7 402 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 H0Y858 1186 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 USP12O75317 370 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SERPINI2O75830 405 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 KRT34O76011 436 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 IL18RAPO95256 599 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 YES1P07947 543 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 NR2F2P24468 414 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SHMT1P34896 483 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 GP5P40197 560 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 EIF2DP41214 584 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 NR2C2P49116 596 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 ALDH7A1P49419 539 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 TAP1Q03518 808 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC13A2Q13183 592 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 KLF1Q13351 362 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 DRAP1Q14919 205 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 NFIXQ14938 502 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 HIST2H2ACQ16777 129 aaPredicted RBP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC35G1Q2M3R5 365 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC36A3Q495N2 470 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 TOR2AQ5JU69 321 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 ZNF767PQ75MW2 155 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 HDDC2Q7Z4H3 204 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 UBR7Q8N806 425 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLAIN1Q8ND83 568 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 PHF10Q8WUB8 498 aaKnown RBP8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SLC44A1Q8WWI5 657 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 FKBP10Q96AY3 582 aa8.99□□□□□ -0.97
CDC42BPA-206ENST00000429440 SERAC1Q96JX3 654 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms